Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF31Q96EP0 MIR6089-201ENST00000616698 64 ntBASIC21.77■■□□□ 1.08
RNF31Q96EP0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF31Q96EP0 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF31Q96EP0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF31Q96EP0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.07
RNF31Q96EP0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF31Q96EP0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF31Q96EP0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF31Q96EP0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.76■■□□□ 1.07
RNF31Q96EP0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RNF31Q96EP0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF31Q96EP0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF31Q96EP0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RNF31Q96EP0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.76■■□□□ 1.07
RNF31Q96EP0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF31Q96EP0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF31Q96EP0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
RNF31Q96EP0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RNF31Q96EP0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF31Q96EP0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF31Q96EP0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF31Q96EP0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.75■■□□□ 1.07
RNF31Q96EP0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RNF31Q96EP0 AL031432.3-201ENST00000607698 485 ntBASIC21.75■■□□□ 1.07
RNF31Q96EP0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF31Q96EP0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF31Q96EP0 AC022211.4-201ENST00000625094 2161 ntBASIC21.75■■□□□ 1.07
RNF31Q96EP0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF31Q96EP0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF31Q96EP0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RNF31Q96EP0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
RNF31Q96EP0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF31Q96EP0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF31Q96EP0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF31Q96EP0 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RNF31Q96EP0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RNF31Q96EP0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF31Q96EP0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
RNF31Q96EP0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF31Q96EP0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.74■■□□□ 1.07
RNF31Q96EP0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RNF31Q96EP0 AC099791.2-201ENST00000605725 427 ntBASIC21.74■■□□□ 1.07
RNF31Q96EP0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RNF31Q96EP0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF31Q96EP0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF31Q96EP0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF31Q96EP0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
RNF31Q96EP0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF31Q96EP0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF31Q96EP0 AL022069.1-201ENST00000568025 1636 ntBASIC21.73■■□□□ 1.07
RNF31Q96EP0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF31Q96EP0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF31Q96EP0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF31Q96EP0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF31Q96EP0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF31Q96EP0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RNF31Q96EP0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.72■■□□□ 1.07
RNF31Q96EP0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF31Q96EP0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF31Q96EP0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF31Q96EP0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF31Q96EP0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF31Q96EP0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF31Q96EP0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF31Q96EP0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF31Q96EP0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF31Q96EP0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RNF31Q96EP0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF31Q96EP0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF31Q96EP0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
RNF31Q96EP0 AC009102.2-201ENST00000606772 1639 ntBASIC21.7■■□□□ 1.06
RNF31Q96EP0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RNF31Q96EP0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF31Q96EP0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF31Q96EP0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.7■■□□□ 1.06
RNF31Q96EP0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF31Q96EP0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF31Q96EP0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF31Q96EP0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF31Q96EP0 AF213884.3-201ENST00000563833 479 ntBASIC21.7■■□□□ 1.06
RNF31Q96EP0 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.7■■□□□ 1.06
RNF31Q96EP0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF31Q96EP0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF31Q96EP0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF31Q96EP0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF31Q96EP0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF31Q96EP0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF31Q96EP0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF31Q96EP0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.69■■□□□ 1.06
RNF31Q96EP0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF31Q96EP0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF31Q96EP0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF31Q96EP0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF31Q96EP0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF31Q96EP0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF31Q96EP0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF31Q96EP0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RNF31Q96EP0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.68■■□□□ 1.06
RNF31Q96EP0 AC006455.2-201ENST00000429931 906 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms