Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CT55Q8WUE5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.31■■□□□ 1
CT55Q8WUE5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.31■■□□□ 1
CT55Q8WUE5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.31■■□□□ 1
CT55Q8WUE5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.31■■□□□ 1
CT55Q8WUE5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.31■■□□□ 1
CT55Q8WUE5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CT55Q8WUE5 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.31■■□□□ 1
CT55Q8WUE5 ALDH1A3-203ENST00000557963 1670 ntBASIC21.31■■□□□ 1
CT55Q8WUE5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CT55Q8WUE5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CT55Q8WUE5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.3■■□□□ 1
CT55Q8WUE5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.3■■□□□ 1
CT55Q8WUE5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.3■■□□□ 1
CT55Q8WUE5 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CT55Q8WUE5 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.3■■□□□ 1
CT55Q8WUE5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CT55Q8WUE5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CT55Q8WUE5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CT55Q8WUE5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.29■■□□□ 1
CT55Q8WUE5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.29■■□□□ 1
CT55Q8WUE5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
CT55Q8WUE5 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.29■■□□□ 1
CT55Q8WUE5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CT55Q8WUE5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.29■■□□□ 1
CT55Q8WUE5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.29■■□□□ 1
CT55Q8WUE5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CT55Q8WUE5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.29■■□□□ 1
CT55Q8WUE5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.29■■□□□ 1
CT55Q8WUE5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.29■■□□□ 1
CT55Q8WUE5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CT55Q8WUE5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CT55Q8WUE5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.29■■□□□ 1
CT55Q8WUE5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CT55Q8WUE5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CT55Q8WUE5 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.28■■□□□ 1
CT55Q8WUE5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.28■■□□□ 1
CT55Q8WUE5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.28■■□□□ 1
CT55Q8WUE5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CT55Q8WUE5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.27■■□□□ 1
CT55Q8WUE5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CT55Q8WUE5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.27■■□□□ 1
CT55Q8WUE5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CT55Q8WUE5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CT55Q8WUE5 AC233992.3-201ENST00000607491 485 ntBASIC21.27■■□□□ 1
CT55Q8WUE5 pRNA.6-201ENST00000610482 90 ntBASIC21.27■■□□□ 1
CT55Q8WUE5 pRNA.5-201ENST00000612139 90 ntBASIC21.27■■□□□ 1
CT55Q8WUE5 MIR6821-201ENST00000617625 74 ntBASIC21.27■■□□□ 1
CT55Q8WUE5 pRNA.11-201ENST00000618423 90 ntBASIC21.27■■□□□ 1
CT55Q8WUE5 pRNA.13-201ENST00000619112 90 ntBASIC21.27■■□□□ 1
CT55Q8WUE5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CT55Q8WUE5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
CT55Q8WUE5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CT55Q8WUE5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CT55Q8WUE5 IRS3P-201ENST00000223076 1006 ntBASIC21.26■□□□□ 0.99
CT55Q8WUE5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CT55Q8WUE5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CT55Q8WUE5 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.26■□□□□ 0.99
CT55Q8WUE5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.26■□□□□ 0.99
CT55Q8WUE5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CT55Q8WUE5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CT55Q8WUE5 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CT55Q8WUE5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CT55Q8WUE5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CT55Q8WUE5 BX842568.3-201ENST00000418104 571 ntBASIC21.25■□□□□ 0.99
CT55Q8WUE5 AC097381.1-201ENST00000429019 1296 ntBASIC21.25■□□□□ 0.99
CT55Q8WUE5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.25■□□□□ 0.99
CT55Q8WUE5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CT55Q8WUE5 AC104564.3-201ENST00000582367 638 ntBASIC21.25■□□□□ 0.99
CT55Q8WUE5 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.25■□□□□ 0.99
CT55Q8WUE5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CT55Q8WUE5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CT55Q8WUE5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.25■□□□□ 0.99
CT55Q8WUE5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CT55Q8WUE5 AC022211.4-201ENST00000625094 2161 ntBASIC21.24■□□□□ 0.99
CT55Q8WUE5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.24■□□□□ 0.99
CT55Q8WUE5 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.24■□□□□ 0.99
CT55Q8WUE5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.24■□□□□ 0.99
CT55Q8WUE5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CT55Q8WUE5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CT55Q8WUE5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.24■□□□□ 0.99
CT55Q8WUE5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CT55Q8WUE5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CT55Q8WUE5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CT55Q8WUE5 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.23■□□□□ 0.99
CT55Q8WUE5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CT55Q8WUE5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CT55Q8WUE5 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.23■□□□□ 0.99
CT55Q8WUE5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.23■□□□□ 0.99
CT55Q8WUE5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CT55Q8WUE5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CT55Q8WUE5 AC087623.3-201ENST00000607047 1098 ntBASIC21.23■□□□□ 0.99
CT55Q8WUE5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CT55Q8WUE5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CT55Q8WUE5 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.23■□□□□ 0.99
CT55Q8WUE5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.23■□□□□ 0.99
CT55Q8WUE5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CT55Q8WUE5 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.22■□□□□ 0.99
CT55Q8WUE5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CT55Q8WUE5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms