Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.53■■□□□ 1.04
VPS37AQ8NEZ2 C9orf163-202ENST00000624034 2573 ntBASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 ATP5G2P3-201ENST00000429083 425 ntBASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 AC120024.1-201ENST00000562672 995 ntBASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS37AQ8NEZ2 PKD1P6-201ENST00000343738 4769 ntBASIC21.52■■□□□ 1.03
VPS37AQ8NEZ2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
VPS37AQ8NEZ2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS37AQ8NEZ2 KRT18P24-201ENST00000344739 1156 ntBASIC21.51■■□□□ 1.03
VPS37AQ8NEZ2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
VPS37AQ8NEZ2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VPS37AQ8NEZ2 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS37AQ8NEZ2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
VPS37AQ8NEZ2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.51■■□□□ 1.03
VPS37AQ8NEZ2 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 AC004987.1-201ENST00000428627 508 ntBASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 THA1P-201ENST00000590384 1145 ntBASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 DUSP8P3-201ENST00000399571 1760 ntBASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VPS37AQ8NEZ2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS37AQ8NEZ2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS37AQ8NEZ2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS37AQ8NEZ2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.49■■□□□ 1.03
VPS37AQ8NEZ2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.49■■□□□ 1.03
VPS37AQ8NEZ2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
VPS37AQ8NEZ2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
VPS37AQ8NEZ2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS37AQ8NEZ2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
VPS37AQ8NEZ2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
VPS37AQ8NEZ2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.49■■□□□ 1.03
VPS37AQ8NEZ2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.49■■□□□ 1.03
VPS37AQ8NEZ2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
VPS37AQ8NEZ2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VPS37AQ8NEZ2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.48■■□□□ 1.03
VPS37AQ8NEZ2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.48■■□□□ 1.03
VPS37AQ8NEZ2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
VPS37AQ8NEZ2 TSPY13P-201ENST00000338964 914 ntBASIC21.48■■□□□ 1.03
VPS37AQ8NEZ2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
VPS37AQ8NEZ2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.48■■□□□ 1.03
VPS37AQ8NEZ2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
VPS37AQ8NEZ2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.48■■□□□ 1.03
VPS37AQ8NEZ2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
VPS37AQ8NEZ2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
VPS37AQ8NEZ2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
VPS37AQ8NEZ2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
VPS37AQ8NEZ2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS37AQ8NEZ2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS37AQ8NEZ2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS37AQ8NEZ2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
VPS37AQ8NEZ2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.47■■□□□ 1.03
VPS37AQ8NEZ2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.47■■□□□ 1.03
VPS37AQ8NEZ2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.47■■□□□ 1.03
VPS37AQ8NEZ2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS37AQ8NEZ2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS37AQ8NEZ2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.47■■□□□ 1.03
VPS37AQ8NEZ2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS37AQ8NEZ2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
VPS37AQ8NEZ2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS37AQ8NEZ2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
VPS37AQ8NEZ2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS37AQ8NEZ2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS37AQ8NEZ2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS37AQ8NEZ2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.46■■□□□ 1.03
VPS37AQ8NEZ2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VPS37AQ8NEZ2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
VPS37AQ8NEZ2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS37AQ8NEZ2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
VPS37AQ8NEZ2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
VPS37AQ8NEZ2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms