Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.71■■□□□ 1.39
TTC16Q8NEE8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC16Q8NEE8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC16Q8NEE8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC16Q8NEE8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TTC16Q8NEE8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC16Q8NEE8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TTC16Q8NEE8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TTC16Q8NEE8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.71■■□□□ 1.39
TTC16Q8NEE8 AC099791.2-201ENST00000605725 427 ntBASIC23.71■■□□□ 1.39
TTC16Q8NEE8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
TTC16Q8NEE8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC16Q8NEE8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TTC16Q8NEE8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.71■■□□□ 1.39
TTC16Q8NEE8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.71■■□□□ 1.39
TTC16Q8NEE8 SYT6-210ENST00000641643 1587 ntBASIC23.7■■□□□ 1.38
TTC16Q8NEE8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TTC16Q8NEE8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TTC16Q8NEE8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.7■■□□□ 1.38
TTC16Q8NEE8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TTC16Q8NEE8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
TTC16Q8NEE8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TTC16Q8NEE8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC16Q8NEE8 AC133561.4-201ENST00000566112 224 ntBASIC23.69■■□□□ 1.38
TTC16Q8NEE8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.69■■□□□ 1.38
TTC16Q8NEE8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC16Q8NEE8 AC009102.2-201ENST00000606772 1639 ntBASIC23.69■■□□□ 1.38
TTC16Q8NEE8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC16Q8NEE8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TTC16Q8NEE8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TTC16Q8NEE8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.68■■□□□ 1.38
TTC16Q8NEE8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TTC16Q8NEE8 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC16Q8NEE8 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC16Q8NEE8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TTC16Q8NEE8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC16Q8NEE8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
TTC16Q8NEE8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
TTC16Q8NEE8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC16Q8NEE8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC16Q8NEE8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.68■■□□□ 1.38
TTC16Q8NEE8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
TTC16Q8NEE8 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TTC16Q8NEE8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TTC16Q8NEE8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
TTC16Q8NEE8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
TTC16Q8NEE8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
TTC16Q8NEE8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.67■■□□□ 1.38
TTC16Q8NEE8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TTC16Q8NEE8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.67■■□□□ 1.38
TTC16Q8NEE8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TTC16Q8NEE8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC16Q8NEE8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.66■■□□□ 1.38
TTC16Q8NEE8 ZNRF2P3-201ENST00000424200 374 ntBASIC23.66■■□□□ 1.38
TTC16Q8NEE8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.66■■□□□ 1.38
TTC16Q8NEE8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.66■■□□□ 1.38
TTC16Q8NEE8 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.66■■□□□ 1.38
TTC16Q8NEE8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.66■■□□□ 1.38
TTC16Q8NEE8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC16Q8NEE8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
TTC16Q8NEE8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TTC16Q8NEE8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.66■■□□□ 1.38
TTC16Q8NEE8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC16Q8NEE8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC16Q8NEE8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.65■■□□□ 1.38
TTC16Q8NEE8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.65■■□□□ 1.38
TTC16Q8NEE8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.65■■□□□ 1.38
TTC16Q8NEE8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC16Q8NEE8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.65■■□□□ 1.38
TTC16Q8NEE8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC16Q8NEE8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TTC16Q8NEE8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
TTC16Q8NEE8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TTC16Q8NEE8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TTC16Q8NEE8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TTC16Q8NEE8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
TTC16Q8NEE8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
TTC16Q8NEE8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
TTC16Q8NEE8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
TTC16Q8NEE8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
TTC16Q8NEE8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TTC16Q8NEE8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
TTC16Q8NEE8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TTC16Q8NEE8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC16Q8NEE8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC16Q8NEE8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC16Q8NEE8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TTC16Q8NEE8 DUX4L19-201ENST00000557448 1267 ntBASIC23.63■■□□□ 1.37
TTC16Q8NEE8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.63■■□□□ 1.37
TTC16Q8NEE8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TTC16Q8NEE8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC16Q8NEE8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.63■■□□□ 1.37
TTC16Q8NEE8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
TTC16Q8NEE8 AC138932.3-201ENST00000567634 1902 ntBASIC23.63■■□□□ 1.37
TTC16Q8NEE8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TTC16Q8NEE8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.62■■□□□ 1.37
TTC16Q8NEE8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TTC16Q8NEE8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TTC16Q8NEE8 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.62■■□□□ 1.37
TTC16Q8NEE8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms