Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 AC092028.1-203ENST00000608262 953 ntBASIC22.55■■□□□ 1.2
PHC3Q8NDX5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PHC3Q8NDX5 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PHC3Q8NDX5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PHC3Q8NDX5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PHC3Q8NDX5 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PHC3Q8NDX5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.54■■□□□ 1.2
PHC3Q8NDX5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PHC3Q8NDX5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.54■■□□□ 1.2
PHC3Q8NDX5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PHC3Q8NDX5 AL161729.1-201ENST00000604104 1402 ntBASIC22.54■■□□□ 1.2
PHC3Q8NDX5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PHC3Q8NDX5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PHC3Q8NDX5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.54■■□□□ 1.2
PHC3Q8NDX5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PHC3Q8NDX5 TSPY9P-201ENST00000440215 945 ntBASIC22.53■■□□□ 1.2
PHC3Q8NDX5 TSPY11P-201ENST00000442607 1045 ntBASIC22.53■■□□□ 1.2
PHC3Q8NDX5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.53■■□□□ 1.2
PHC3Q8NDX5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.53■■□□□ 1.2
PHC3Q8NDX5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.53■■□□□ 1.2
PHC3Q8NDX5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PHC3Q8NDX5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PHC3Q8NDX5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PHC3Q8NDX5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.52■■□□□ 1.2
PHC3Q8NDX5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
PHC3Q8NDX5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PHC3Q8NDX5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PHC3Q8NDX5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
PHC3Q8NDX5 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PHC3Q8NDX5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.52■■□□□ 1.2
PHC3Q8NDX5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
PHC3Q8NDX5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PHC3Q8NDX5 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PHC3Q8NDX5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.5■■□□□ 1.19
PHC3Q8NDX5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.5■■□□□ 1.19
PHC3Q8NDX5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.5■■□□□ 1.19
PHC3Q8NDX5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PHC3Q8NDX5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.5■■□□□ 1.19
PHC3Q8NDX5 UNC93B8-201ENST00000511903 705 ntBASIC22.5■■□□□ 1.19
PHC3Q8NDX5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.5■■□□□ 1.19
PHC3Q8NDX5 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PHC3Q8NDX5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PHC3Q8NDX5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 AC131274.2-201ENST00000580697 1507 ntBASIC22.49■■□□□ 1.19
PHC3Q8NDX5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
PHC3Q8NDX5 C9orf163-202ENST00000624034 2573 ntBASIC22.48■■□□□ 1.19
PHC3Q8NDX5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PHC3Q8NDX5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
PHC3Q8NDX5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
PHC3Q8NDX5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PHC3Q8NDX5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
PHC3Q8NDX5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
PHC3Q8NDX5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PHC3Q8NDX5 DUSP8P5-201ENST00000422884 1815 ntBASIC22.47■■□□□ 1.19
PHC3Q8NDX5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.47■■□□□ 1.19
PHC3Q8NDX5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.47■■□□□ 1.19
PHC3Q8NDX5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PHC3Q8NDX5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PHC3Q8NDX5 LINC01124-201ENST00000409786 2117 ntBASIC22.47■■□□□ 1.19
PHC3Q8NDX5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PHC3Q8NDX5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.47■■□□□ 1.19
PHC3Q8NDX5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PHC3Q8NDX5 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PHC3Q8NDX5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.47■■□□□ 1.19
PHC3Q8NDX5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.47■■□□□ 1.19
PHC3Q8NDX5 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PHC3Q8NDX5 AC141586.4-201ENST00000624558 1573 ntBASIC22.46■■□□□ 1.19
PHC3Q8NDX5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PHC3Q8NDX5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms