Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
RNF169Q8NCN4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.73■■□□□ 1.55
RNF169Q8NCN4 AC022211.4-201ENST00000625094 2161 ntBASIC24.73■■□□□ 1.55
RNF169Q8NCN4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.72■■□□□ 1.55
RNF169Q8NCN4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF169Q8NCN4 C17orf82-201ENST00000623772 1530 ntBASIC24.72■■□□□ 1.55
RNF169Q8NCN4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
RNF169Q8NCN4 RARRES2P6-201ENST00000567333 442 ntBASIC24.72■■□□□ 1.55
RNF169Q8NCN4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.72■■□□□ 1.55
RNF169Q8NCN4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.72■■□□□ 1.55
RNF169Q8NCN4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
RNF169Q8NCN4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.71■■□□□ 1.55
RNF169Q8NCN4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RNF169Q8NCN4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC24.71■■□□□ 1.55
RNF169Q8NCN4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC24.71■■□□□ 1.55
RNF169Q8NCN4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC24.71■■□□□ 1.55
RNF169Q8NCN4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
RNF169Q8NCN4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
RNF169Q8NCN4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.71■■□□□ 1.55
RNF169Q8NCN4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
RNF169Q8NCN4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.7■■□□□ 1.54
RNF169Q8NCN4 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
RNF169Q8NCN4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.7■■□□□ 1.54
RNF169Q8NCN4 AC006455.2-201ENST00000429931 906 ntBASIC24.7■■□□□ 1.54
RNF169Q8NCN4 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.7■■□□□ 1.54
RNF169Q8NCN4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RNF169Q8NCN4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RNF169Q8NCN4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
RNF169Q8NCN4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
RNF169Q8NCN4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RNF169Q8NCN4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
RNF169Q8NCN4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF169Q8NCN4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF169Q8NCN4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF169Q8NCN4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF169Q8NCN4 AC008764.7-201ENST00000593779 1081 ntBASIC24.69■■□□□ 1.54
RNF169Q8NCN4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.69■■□□□ 1.54
RNF169Q8NCN4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
RNF169Q8NCN4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
RNF169Q8NCN4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF169Q8NCN4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF169Q8NCN4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
RNF169Q8NCN4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC24.68■■□□□ 1.54
RNF169Q8NCN4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF169Q8NCN4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
RNF169Q8NCN4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF169Q8NCN4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
RNF169Q8NCN4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.68■■□□□ 1.54
RNF169Q8NCN4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RNF169Q8NCN4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RNF169Q8NCN4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RNF169Q8NCN4 AC091305.1-201ENST00000479476 895 ntBASIC24.67■■□□□ 1.54
RNF169Q8NCN4 AC009086.3-201ENST00000623486 1008 ntBASIC24.67■■□□□ 1.54
RNF169Q8NCN4 AC241377.3-202ENST00000626088 1088 ntBASIC24.67■■□□□ 1.54
RNF169Q8NCN4 AC241585.3-202ENST00000628937 1088 ntBASIC24.67■■□□□ 1.54
RNF169Q8NCN4 AC245100.8-202ENST00000629247 1058 ntBASIC24.67■■□□□ 1.54
RNF169Q8NCN4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.67■■□□□ 1.54
RNF169Q8NCN4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.67■■□□□ 1.54
RNF169Q8NCN4 AC020928.2-201ENST00000588717 2197 ntBASIC24.67■■□□□ 1.54
RNF169Q8NCN4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
RNF169Q8NCN4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RNF169Q8NCN4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RNF169Q8NCN4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.66■■□□□ 1.54
RNF169Q8NCN4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.66■■□□□ 1.54
RNF169Q8NCN4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
RNF169Q8NCN4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.66■■□□□ 1.54
RNF169Q8NCN4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.66■■□□□ 1.54
RNF169Q8NCN4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RNF169Q8NCN4 AL161729.1-201ENST00000604104 1402 ntBASIC24.66■■□□□ 1.54
RNF169Q8NCN4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RNF169Q8NCN4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.65■■□□□ 1.54
RNF169Q8NCN4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RNF169Q8NCN4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
RNF169Q8NCN4 CA15P2-201ENST00000611168 834 ntBASIC24.65■■□□□ 1.54
RNF169Q8NCN4 AC011298.3-201ENST00000615796 283 ntBASIC24.65■■□□□ 1.54
RNF169Q8NCN4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.65■■□□□ 1.54
RNF169Q8NCN4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.65■■□□□ 1.54
RNF169Q8NCN4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.65■■□□□ 1.54
RNF169Q8NCN4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
RNF169Q8NCN4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
RNF169Q8NCN4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
RNF169Q8NCN4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RNF169Q8NCN4 ALDH1A3-203ENST00000557963 1670 ntBASIC24.65■■□□□ 1.54
RNF169Q8NCN4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.64■■□□□ 1.54
RNF169Q8NCN4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF169Q8NCN4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RNF169Q8NCN4 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.64■■□□□ 1.54
RNF169Q8NCN4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.64■■□□□ 1.54
RNF169Q8NCN4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RNF169Q8NCN4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RNF169Q8NCN4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RNF169Q8NCN4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF169Q8NCN4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.63■■□□□ 1.53
RNF169Q8NCN4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF169Q8NCN4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF169Q8NCN4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF169Q8NCN4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF169Q8NCN4 AL138724.1-201ENST00000606771 1088 ntBASIC24.63■■□□□ 1.53
RNF169Q8NCN4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
RNF169Q8NCN4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms