Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.15■□□□□ 0.82
CNEP1R1Q8N9A8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNEP1R1Q8N9A8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNEP1R1Q8N9A8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.14■□□□□ 0.81
CNEP1R1Q8N9A8 AC092171.4-201ENST00000609130 632 ntBASIC20.14■□□□□ 0.81
CNEP1R1Q8N9A8 AC005837.3-201ENST00000612163 286 ntBASIC20.14■□□□□ 0.81
CNEP1R1Q8N9A8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CNEP1R1Q8N9A8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNEP1R1Q8N9A8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNEP1R1Q8N9A8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNEP1R1Q8N9A8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 AC135279.3-201ENST00000610945 1311 ntBASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 AC106739.1-201ENST00000617035 715 ntBASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNEP1R1Q8N9A8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 SYT6-210ENST00000641643 1587 ntBASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 DUX4L19-201ENST00000557448 1267 ntBASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 AC099791.2-201ENST00000605725 427 ntBASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNEP1R1Q8N9A8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNEP1R1Q8N9A8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.11■□□□□ 0.81
CNEP1R1Q8N9A8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNEP1R1Q8N9A8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.11■□□□□ 0.81
CNEP1R1Q8N9A8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.11■□□□□ 0.81
CNEP1R1Q8N9A8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.11■□□□□ 0.81
CNEP1R1Q8N9A8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNEP1R1Q8N9A8 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CNEP1R1Q8N9A8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNEP1R1Q8N9A8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNEP1R1Q8N9A8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNEP1R1Q8N9A8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.1■□□□□ 0.81
CNEP1R1Q8N9A8 AC024257.2-201ENST00000549699 147 ntBASIC20.1■□□□□ 0.81
CNEP1R1Q8N9A8 AC133561.4-201ENST00000566112 224 ntBASIC20.1■□□□□ 0.81
CNEP1R1Q8N9A8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.1■□□□□ 0.81
CNEP1R1Q8N9A8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.1■□□□□ 0.81
CNEP1R1Q8N9A8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNEP1R1Q8N9A8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.1■□□□□ 0.81
CNEP1R1Q8N9A8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CNEP1R1Q8N9A8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CNEP1R1Q8N9A8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.09■□□□□ 0.81
CNEP1R1Q8N9A8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CNEP1R1Q8N9A8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.09■□□□□ 0.81
CNEP1R1Q8N9A8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNEP1R1Q8N9A8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNEP1R1Q8N9A8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CNEP1R1Q8N9A8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNEP1R1Q8N9A8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNEP1R1Q8N9A8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.09■□□□□ 0.81
CNEP1R1Q8N9A8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.09■□□□□ 0.81
CNEP1R1Q8N9A8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNEP1R1Q8N9A8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CNEP1R1Q8N9A8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CNEP1R1Q8N9A8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNEP1R1Q8N9A8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CNEP1R1Q8N9A8 C17orf82-201ENST00000623772 1530 ntBASIC20.08■□□□□ 0.81
CNEP1R1Q8N9A8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CNEP1R1Q8N9A8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.08■□□□□ 0.81
CNEP1R1Q8N9A8 AC142381.2-201ENST00000566120 298 ntBASIC20.08■□□□□ 0.81
CNEP1R1Q8N9A8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CNEP1R1Q8N9A8 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CNEP1R1Q8N9A8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CNEP1R1Q8N9A8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.07■□□□□ 0.8
CNEP1R1Q8N9A8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNEP1R1Q8N9A8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.07■□□□□ 0.8
CNEP1R1Q8N9A8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNEP1R1Q8N9A8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
CNEP1R1Q8N9A8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNEP1R1Q8N9A8 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.07■□□□□ 0.8
CNEP1R1Q8N9A8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CNEP1R1Q8N9A8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CNEP1R1Q8N9A8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNEP1R1Q8N9A8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNEP1R1Q8N9A8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CNEP1R1Q8N9A8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.06■□□□□ 0.8
CNEP1R1Q8N9A8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.06■□□□□ 0.8
CNEP1R1Q8N9A8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CNEP1R1Q8N9A8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms