Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF39Q8N4T4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ARHGEF39Q8N4T4 AC008406.3-201ENST00000620001 1374 ntBASIC21.53■■□□□ 1.04
ARHGEF39Q8N4T4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF39Q8N4T4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
ARHGEF39Q8N4T4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.53■■□□□ 1.04
ARHGEF39Q8N4T4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.53■■□□□ 1.04
ARHGEF39Q8N4T4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.53■■□□□ 1.04
ARHGEF39Q8N4T4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF39Q8N4T4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF39Q8N4T4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.53■■□□□ 1.04
ARHGEF39Q8N4T4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ARHGEF39Q8N4T4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF39Q8N4T4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ARHGEF39Q8N4T4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF39Q8N4T4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ARHGEF39Q8N4T4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.52■■□□□ 1.04
ARHGEF39Q8N4T4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ARHGEF39Q8N4T4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ARHGEF39Q8N4T4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF39Q8N4T4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF39Q8N4T4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF39Q8N4T4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF39Q8N4T4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ARHGEF39Q8N4T4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ARHGEF39Q8N4T4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.51■■□□□ 1.03
ARHGEF39Q8N4T4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF39Q8N4T4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.5■■□□□ 1.03
ARHGEF39Q8N4T4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ARHGEF39Q8N4T4 AL136116.3-201ENST00000402907 1138 ntBASIC21.5■■□□□ 1.03
ARHGEF39Q8N4T4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ARHGEF39Q8N4T4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.49■■□□□ 1.03
ARHGEF39Q8N4T4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF39Q8N4T4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF39Q8N4T4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.49■■□□□ 1.03
ARHGEF39Q8N4T4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF39Q8N4T4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF39Q8N4T4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ARHGEF39Q8N4T4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.49■■□□□ 1.03
ARHGEF39Q8N4T4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.49■■□□□ 1.03
ARHGEF39Q8N4T4 C17orf82-201ENST00000623772 1530 ntBASIC21.49■■□□□ 1.03
ARHGEF39Q8N4T4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF39Q8N4T4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF39Q8N4T4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF39Q8N4T4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
ARHGEF39Q8N4T4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF39Q8N4T4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF39Q8N4T4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF39Q8N4T4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.48■■□□□ 1.03
ARHGEF39Q8N4T4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF39Q8N4T4 ABCB10P4-201ENST00000566803 2184 ntBASIC21.48■■□□□ 1.03
ARHGEF39Q8N4T4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF39Q8N4T4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ARHGEF39Q8N4T4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ARHGEF39Q8N4T4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF39Q8N4T4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.47■■□□□ 1.03
ARHGEF39Q8N4T4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ARHGEF39Q8N4T4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF39Q8N4T4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.46■■□□□ 1.03
ARHGEF39Q8N4T4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF39Q8N4T4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
ARHGEF39Q8N4T4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF39Q8N4T4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF39Q8N4T4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.46■■□□□ 1.03
ARHGEF39Q8N4T4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF39Q8N4T4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ARHGEF39Q8N4T4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF39Q8N4T4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ARHGEF39Q8N4T4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF39Q8N4T4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF39Q8N4T4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.45■■□□□ 1.02
ARHGEF39Q8N4T4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF39Q8N4T4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF39Q8N4T4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ARHGEF39Q8N4T4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
ARHGEF39Q8N4T4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.44■■□□□ 1.02
ARHGEF39Q8N4T4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.44■■□□□ 1.02
ARHGEF39Q8N4T4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ARHGEF39Q8N4T4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ARHGEF39Q8N4T4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARHGEF39Q8N4T4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARHGEF39Q8N4T4 AC093323.1-202ENST00000635031 2045 ntBASIC21.43■■□□□ 1.02
ARHGEF39Q8N4T4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARHGEF39Q8N4T4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
ARHGEF39Q8N4T4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ARHGEF39Q8N4T4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARHGEF39Q8N4T4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
ARHGEF39Q8N4T4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARHGEF39Q8N4T4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARHGEF39Q8N4T4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ARHGEF39Q8N4T4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ARHGEF39Q8N4T4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.42■■□□□ 1.02
ARHGEF39Q8N4T4 SRD5A1P1-201ENST00000442297 786 ntBASIC21.42■■□□□ 1.02
ARHGEF39Q8N4T4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.42■■□□□ 1.02
ARHGEF39Q8N4T4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ARHGEF39Q8N4T4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.42■■□□□ 1.02
ARHGEF39Q8N4T4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.42■■□□□ 1.02
ARHGEF39Q8N4T4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
ARHGEF39Q8N4T4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ARHGEF39Q8N4T4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms