Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
ARHGEF28Q8N1W1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
ARHGEF28Q8N1W1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
ARHGEF28Q8N1W1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC31.89■■■□□ 2.7
ARHGEF28Q8N1W1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC31.89■■■□□ 2.7
ARHGEF28Q8N1W1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
ARHGEF28Q8N1W1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
ARHGEF28Q8N1W1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31.89■■■□□ 2.69
ARHGEF28Q8N1W1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC31.89■■■□□ 2.69
ARHGEF28Q8N1W1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
ARHGEF28Q8N1W1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
ARHGEF28Q8N1W1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
ARHGEF28Q8N1W1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
ARHGEF28Q8N1W1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC31.87■■■□□ 2.69
ARHGEF28Q8N1W1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC31.87■■■□□ 2.69
ARHGEF28Q8N1W1 HES6-206ENST00000409574 738 ntTSL 2 BASIC31.87■■■□□ 2.69
ARHGEF28Q8N1W1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC31.87■■■□□ 2.69
ARHGEF28Q8N1W1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.87■■■□□ 2.69
ARHGEF28Q8N1W1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.87■■■□□ 2.69
ARHGEF28Q8N1W1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC31.87■■■□□ 2.69
ARHGEF28Q8N1W1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
ARHGEF28Q8N1W1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
ARHGEF28Q8N1W1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC31.87■■■□□ 2.69
ARHGEF28Q8N1W1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
ARHGEF28Q8N1W1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
ARHGEF28Q8N1W1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ARHGEF28Q8N1W1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC31.86■■■□□ 2.69
ARHGEF28Q8N1W1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
ARHGEF28Q8N1W1 SLC47A1P1-202ENST00000449666 945 ntBASIC31.86■■■□□ 2.69
ARHGEF28Q8N1W1 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
ARHGEF28Q8N1W1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
ARHGEF28Q8N1W1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ARHGEF28Q8N1W1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ARHGEF28Q8N1W1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
ARHGEF28Q8N1W1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
ARHGEF28Q8N1W1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
ARHGEF28Q8N1W1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC31.84■■■□□ 2.69
ARHGEF28Q8N1W1 AP003733.4-201ENST00000623785 1697 ntBASIC31.84■■■□□ 2.69
ARHGEF28Q8N1W1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
ARHGEF28Q8N1W1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
ARHGEF28Q8N1W1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC31.84■■■□□ 2.69
ARHGEF28Q8N1W1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC31.84■■■□□ 2.69
ARHGEF28Q8N1W1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
ARHGEF28Q8N1W1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC31.84■■■□□ 2.69
ARHGEF28Q8N1W1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
ARHGEF28Q8N1W1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
ARHGEF28Q8N1W1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.83■■■□□ 2.69
ARHGEF28Q8N1W1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
ARHGEF28Q8N1W1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC31.83■■■□□ 2.69
ARHGEF28Q8N1W1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ARHGEF28Q8N1W1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.82■■■□□ 2.68
ARHGEF28Q8N1W1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
ARHGEF28Q8N1W1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC31.82■■■□□ 2.68
ARHGEF28Q8N1W1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ARHGEF28Q8N1W1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ARHGEF28Q8N1W1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ARHGEF28Q8N1W1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ARHGEF28Q8N1W1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ARHGEF28Q8N1W1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC31.81■■■□□ 2.68
ARHGEF28Q8N1W1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
ARHGEF28Q8N1W1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC31.8■■■□□ 2.68
ARHGEF28Q8N1W1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC31.8■■■□□ 2.68
ARHGEF28Q8N1W1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC31.8■■■□□ 2.68
ARHGEF28Q8N1W1 MIR3181-201ENST00000578512 73 ntBASIC31.8■■■□□ 2.68
ARHGEF28Q8N1W1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ARHGEF28Q8N1W1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ARHGEF28Q8N1W1 AC008764.7-201ENST00000593779 1081 ntBASIC31.8■■■□□ 2.68
ARHGEF28Q8N1W1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ARHGEF28Q8N1W1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ARHGEF28Q8N1W1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC31.8■■■□□ 2.68
ARHGEF28Q8N1W1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ARHGEF28Q8N1W1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
ARHGEF28Q8N1W1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
ARHGEF28Q8N1W1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
ARHGEF28Q8N1W1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC31.79■■■□□ 2.68
ARHGEF28Q8N1W1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC31.79■■■□□ 2.68
ARHGEF28Q8N1W1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
ARHGEF28Q8N1W1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC31.78■■■□□ 2.68
ARHGEF28Q8N1W1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
ARHGEF28Q8N1W1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC31.78■■■□□ 2.68
ARHGEF28Q8N1W1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
ARHGEF28Q8N1W1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ARHGEF28Q8N1W1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
ARHGEF28Q8N1W1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
ARHGEF28Q8N1W1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
ARHGEF28Q8N1W1 AC138932.3-201ENST00000567634 1902 ntBASIC31.76■■■□□ 2.68
ARHGEF28Q8N1W1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
ARHGEF28Q8N1W1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC31.76■■■□□ 2.67
ARHGEF28Q8N1W1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC31.75■■■□□ 2.67
ARHGEF28Q8N1W1 BX842568.3-201ENST00000418104 571 ntBASIC31.75■■■□□ 2.67
ARHGEF28Q8N1W1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ARHGEF28Q8N1W1 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
ARHGEF28Q8N1W1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC31.75■■■□□ 2.67
ARHGEF28Q8N1W1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ARHGEF28Q8N1W1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC31.74■■■□□ 2.67
ARHGEF28Q8N1W1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ARHGEF28Q8N1W1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ARHGEF28Q8N1W1 AC097381.1-201ENST00000429019 1296 ntBASIC31.74■■■□□ 2.67
ARHGEF28Q8N1W1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC31.74■■■□□ 2.67
ARHGEF28Q8N1W1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC31.74■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms