Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.04■□□□□ 0.8
LINC00346Q8IVM7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.04■□□□□ 0.8
LINC00346Q8IVM7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.04■□□□□ 0.8
LINC00346Q8IVM7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.04■□□□□ 0.8
LINC00346Q8IVM7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.04■□□□□ 0.8
LINC00346Q8IVM7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00346Q8IVM7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00346Q8IVM7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00346Q8IVM7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00346Q8IVM7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00346Q8IVM7 AC103724.3-201ENST00000564481 992 ntBASIC20.03■□□□□ 0.8
LINC00346Q8IVM7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00346Q8IVM7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00346Q8IVM7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00346Q8IVM7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00346Q8IVM7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00346Q8IVM7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00346Q8IVM7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00346Q8IVM7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00346Q8IVM7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00346Q8IVM7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.02■□□□□ 0.8
LINC00346Q8IVM7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00346Q8IVM7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00346Q8IVM7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.02■□□□□ 0.8
LINC00346Q8IVM7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00346Q8IVM7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.02■□□□□ 0.8
LINC00346Q8IVM7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LINC00346Q8IVM7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LINC00346Q8IVM7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.02■□□□□ 0.79
LINC00346Q8IVM7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.02■□□□□ 0.79
LINC00346Q8IVM7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LINC00346Q8IVM7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00346Q8IVM7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.01■□□□□ 0.79
LINC00346Q8IVM7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00346Q8IVM7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.01■□□□□ 0.79
LINC00346Q8IVM7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.01■□□□□ 0.79
LINC00346Q8IVM7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00346Q8IVM7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LINC00346Q8IVM7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LINC00346Q8IVM7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00346Q8IVM7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.01■□□□□ 0.79
LINC00346Q8IVM7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.01■□□□□ 0.79
LINC00346Q8IVM7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00346Q8IVM7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00346Q8IVM7 H19-210ENST00000439725 1929 ntTSL 2 BASIC20■□□□□ 0.79
LINC00346Q8IVM7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20■□□□□ 0.79
LINC00346Q8IVM7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20■□□□□ 0.79
LINC00346Q8IVM7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20■□□□□ 0.79
LINC00346Q8IVM7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC00346Q8IVM7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LINC00346Q8IVM7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC00346Q8IVM7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
LINC00346Q8IVM7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
LINC00346Q8IVM7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC00346Q8IVM7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.99■□□□□ 0.79
LINC00346Q8IVM7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.99■□□□□ 0.79
LINC00346Q8IVM7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC00346Q8IVM7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC00346Q8IVM7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LINC00346Q8IVM7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.98■□□□□ 0.79
LINC00346Q8IVM7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LINC00346Q8IVM7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
LINC00346Q8IVM7 AC012676.1-201ENST00000574705 1949 ntBASIC19.98■□□□□ 0.79
LINC00346Q8IVM7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LINC00346Q8IVM7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LINC00346Q8IVM7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.98■□□□□ 0.79
LINC00346Q8IVM7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.98■□□□□ 0.79
LINC00346Q8IVM7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
LINC00346Q8IVM7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 AC092068.2-201ENST00000590491 1708 ntBASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 AC004448.1-201ENST00000458332 883 ntBASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LINC00346Q8IVM7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC00346Q8IVM7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC00346Q8IVM7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC00346Q8IVM7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC00346Q8IVM7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
LINC00346Q8IVM7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC00346Q8IVM7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
LINC00346Q8IVM7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC00346Q8IVM7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LINC00346Q8IVM7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LINC00346Q8IVM7 AL031848.2-201ENST00000607670 837 ntBASIC19.96■□□□□ 0.79
LINC00346Q8IVM7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LINC00346Q8IVM7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LINC00346Q8IVM7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC00346Q8IVM7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.95■□□□□ 0.78
LINC00346Q8IVM7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.95■□□□□ 0.78
LINC00346Q8IVM7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms