Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC71Q8IV32 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC71Q8IV32 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC71Q8IV32 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC71Q8IV32 UNC93B8-201ENST00000511903 705 ntBASIC21.22■□□□□ 0.99
CCDC71Q8IV32 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC71Q8IV32 AC120024.1-201ENST00000562672 995 ntBASIC21.22■□□□□ 0.99
CCDC71Q8IV32 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC71Q8IV32 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC71Q8IV32 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CCDC71Q8IV32 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC71Q8IV32 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC71Q8IV32 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC71Q8IV32 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC71Q8IV32 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC71Q8IV32 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC71Q8IV32 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC71Q8IV32 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC71Q8IV32 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC71Q8IV32 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC71Q8IV32 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC71Q8IV32 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC71Q8IV32 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC71Q8IV32 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC71Q8IV32 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC71Q8IV32 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC71Q8IV32 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC71Q8IV32 TSPY9P-201ENST00000440215 945 ntBASIC21.2■□□□□ 0.98
CCDC71Q8IV32 TSPY11P-201ENST00000442607 1045 ntBASIC21.2■□□□□ 0.98
CCDC71Q8IV32 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC71Q8IV32 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.2■□□□□ 0.98
CCDC71Q8IV32 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC71Q8IV32 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.2■□□□□ 0.98
CCDC71Q8IV32 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC71Q8IV32 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC71Q8IV32 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71Q8IV32 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC71Q8IV32 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CCDC71Q8IV32 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC71Q8IV32 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71Q8IV32 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71Q8IV32 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CCDC71Q8IV32 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71Q8IV32 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC71Q8IV32 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC71Q8IV32 KRT16P3-201ENST00000439127 1283 ntBASIC21.19■□□□□ 0.98
CCDC71Q8IV32 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC71Q8IV32 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC71Q8IV32 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC71Q8IV32 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC71Q8IV32 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC71Q8IV32 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC71Q8IV32 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC71Q8IV32 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC71Q8IV32 EP400NL-214ENST00000641289 2402 ntBASIC21.18■□□□□ 0.98
CCDC71Q8IV32 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC71Q8IV32 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC71Q8IV32 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCDC71Q8IV32 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCDC71Q8IV32 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC71Q8IV32 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC71Q8IV32 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC71Q8IV32 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCDC71Q8IV32 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC71Q8IV32 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC71Q8IV32 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC71Q8IV32 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC71Q8IV32 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.17■□□□□ 0.98
CCDC71Q8IV32 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.17■□□□□ 0.98
CCDC71Q8IV32 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC71Q8IV32 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC71Q8IV32 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC71Q8IV32 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC71Q8IV32 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC71Q8IV32 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC71Q8IV32 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC71Q8IV32 AC137630.3-201ENST00000607245 391 ntBASIC21.16■□□□□ 0.98
CCDC71Q8IV32 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CCDC71Q8IV32 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCDC71Q8IV32 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCDC71Q8IV32 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCDC71Q8IV32 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms