Protein–RNA interactions for Protein: Q86YD5

LDLRAD3, Low-density lipoprotein receptor class A domain-containing protein 3, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3Q86YD5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 GUSBP5-201ENST00000418136 578 ntBASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LDLRAD3Q86YD5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 Z92544.1-202ENST00000571933 1220 ntBASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LDLRAD3Q86YD5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAD3Q86YD5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAD3Q86YD5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAD3Q86YD5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.2■□□□□ 0.66
LDLRAD3Q86YD5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAD3Q86YD5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.2■□□□□ 0.66
LDLRAD3Q86YD5 LINC00565-201ENST00000562710 2331 ntBASIC19.2■□□□□ 0.66
LDLRAD3Q86YD5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAD3Q86YD5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.2■□□□□ 0.66
LDLRAD3Q86YD5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAD3Q86YD5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAD3Q86YD5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 KRT18P24-201ENST00000344739 1156 ntBASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 AL117328.2-201ENST00000624617 1940 ntBASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAD3Q86YD5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAD3Q86YD5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAD3Q86YD5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAD3Q86YD5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAD3Q86YD5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LDLRAD3Q86YD5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.18■□□□□ 0.66
LDLRAD3Q86YD5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAD3Q86YD5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAD3Q86YD5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAD3Q86YD5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDLRAD3Q86YD5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDLRAD3Q86YD5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDLRAD3Q86YD5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LDLRAD3Q86YD5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LDLRAD3Q86YD5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.17■□□□□ 0.66
LDLRAD3Q86YD5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDLRAD3Q86YD5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LDLRAD3Q86YD5 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDLRAD3Q86YD5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LDLRAD3Q86YD5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDLRAD3Q86YD5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDLRAD3Q86YD5 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDLRAD3Q86YD5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDLRAD3Q86YD5 AL592295.1-201ENST00000400984 884 ntBASIC19.16■□□□□ 0.66
LDLRAD3Q86YD5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LDLRAD3Q86YD5 THA1P-201ENST00000590384 1145 ntBASIC19.16■□□□□ 0.66
LDLRAD3Q86YD5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LDLRAD3Q86YD5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.15■□□□□ 0.66
LDLRAD3Q86YD5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDLRAD3Q86YD5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.15■□□□□ 0.66
LDLRAD3Q86YD5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LDLRAD3Q86YD5 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDLRAD3Q86YD5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.15■□□□□ 0.66
LDLRAD3Q86YD5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDLRAD3Q86YD5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LDLRAD3Q86YD5 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LDLRAD3Q86YD5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LDLRAD3Q86YD5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LDLRAD3Q86YD5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LDLRAD3Q86YD5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LDLRAD3Q86YD5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
LDLRAD3Q86YD5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 AC239859.2-201ENST00000444165 318 ntBASIC19.14■□□□□ 0.65
LDLRAD3Q86YD5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms