Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
COL23A1Q86Y22 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
COL23A1Q86Y22 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC28.97■■■□□ 2.23
COL23A1Q86Y22 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.97■■■□□ 2.23
COL23A1Q86Y22 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC28.97■■■□□ 2.23
COL23A1Q86Y22 ESRRAP2-201ENST00000418437 1549 ntBASIC28.97■■■□□ 2.23
COL23A1Q86Y22 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
COL23A1Q86Y22 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
COL23A1Q86Y22 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.94■■■□□ 2.22
COL23A1Q86Y22 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.94■■■□□ 2.22
COL23A1Q86Y22 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC28.94■■■□□ 2.22
COL23A1Q86Y22 AC080038.1-201ENST00000611274 1154 ntBASIC28.94■■■□□ 2.22
COL23A1Q86Y22 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC28.94■■■□□ 2.22
COL23A1Q86Y22 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
COL23A1Q86Y22 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
COL23A1Q86Y22 ABHD17AP1-201ENST00000358206 933 ntBASIC28.93■■■□□ 2.22
COL23A1Q86Y22 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
COL23A1Q86Y22 RAP2CP1-201ENST00000605103 478 ntBASIC28.93■■■□□ 2.22
COL23A1Q86Y22 AL022069.1-201ENST00000568025 1636 ntBASIC28.93■■■□□ 2.22
COL23A1Q86Y22 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 GXYLT1P5-201ENST00000614548 1189 ntBASIC28.92■■■□□ 2.22
COL23A1Q86Y22 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.9■■■□□ 2.22
COL23A1Q86Y22 LINC02228-203ENST00000641970 1355 ntBASIC28.9■■■□□ 2.22
COL23A1Q86Y22 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.9■■■□□ 2.22
COL23A1Q86Y22 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC28.9■■■□□ 2.22
COL23A1Q86Y22 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC28.9■■■□□ 2.22
COL23A1Q86Y22 EMC9-206ENST00000560403 872 ntTSL 2 BASIC28.9■■■□□ 2.22
COL23A1Q86Y22 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.9■■■□□ 2.22
COL23A1Q86Y22 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.22
COL23A1Q86Y22 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL23A1Q86Y22 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC28.89■■■□□ 2.22
COL23A1Q86Y22 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC28.89■■■□□ 2.22
COL23A1Q86Y22 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.89■■■□□ 2.21
COL23A1Q86Y22 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 AC142086.6-201ENST00000621154 1765 ntBASIC28.88■■■□□ 2.21
COL23A1Q86Y22 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 CDCA4P2-201ENST00000441182 718 ntBASIC28.87■■■□□ 2.21
COL23A1Q86Y22 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 AC010501.1-201ENST00000606270 1962 ntBASIC28.87■■■□□ 2.21
COL23A1Q86Y22 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
COL23A1Q86Y22 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.85■■■□□ 2.21
COL23A1Q86Y22 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC28.85■■■□□ 2.21
COL23A1Q86Y22 AC006015.1-201ENST00000429970 570 ntBASIC28.85■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms