Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
COL23A1Q86Y22 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
COL23A1Q86Y22 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC28.97■■■□□ 2.23
COL23A1Q86Y22 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.97■■■□□ 2.23
COL23A1Q86Y22 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC28.97■■■□□ 2.23
COL23A1Q86Y22 ESRRAP2-201ENST00000418437 1549 ntBASIC28.97■■■□□ 2.23
COL23A1Q86Y22 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
COL23A1Q86Y22 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
COL23A1Q86Y22 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL23A1Q86Y22 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
COL23A1Q86Y22 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.94■■■□□ 2.22
COL23A1Q86Y22 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.94■■■□□ 2.22
COL23A1Q86Y22 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC28.94■■■□□ 2.22
COL23A1Q86Y22 AC080038.1-201ENST00000611274 1154 ntBASIC28.94■■■□□ 2.22
COL23A1Q86Y22 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC28.94■■■□□ 2.22
COL23A1Q86Y22 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
COL23A1Q86Y22 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
COL23A1Q86Y22 ABHD17AP1-201ENST00000358206 933 ntBASIC28.93■■■□□ 2.22
COL23A1Q86Y22 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
COL23A1Q86Y22 RAP2CP1-201ENST00000605103 478 ntBASIC28.93■■■□□ 2.22
COL23A1Q86Y22 AL022069.1-201ENST00000568025 1636 ntBASIC28.93■■■□□ 2.22
COL23A1Q86Y22 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 GXYLT1P5-201ENST00000614548 1189 ntBASIC28.92■■■□□ 2.22
COL23A1Q86Y22 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
COL23A1Q86Y22 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.91■■■□□ 2.22
COL23A1Q86Y22 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.9■■■□□ 2.22
COL23A1Q86Y22 LINC02228-203ENST00000641970 1355 ntBASIC28.9■■■□□ 2.22
COL23A1Q86Y22 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.9■■■□□ 2.22
COL23A1Q86Y22 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC28.9■■■□□ 2.22
COL23A1Q86Y22 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC28.9■■■□□ 2.22
COL23A1Q86Y22 EMC9-206ENST00000560403 872 ntTSL 2 BASIC28.9■■■□□ 2.22
COL23A1Q86Y22 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.9■■■□□ 2.22
COL23A1Q86Y22 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.89■■■□□ 2.22
COL23A1Q86Y22 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL23A1Q86Y22 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC28.89■■■□□ 2.22
COL23A1Q86Y22 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC28.89■■■□□ 2.22
COL23A1Q86Y22 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.89■■■□□ 2.21
COL23A1Q86Y22 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 AC142086.6-201ENST00000621154 1765 ntBASIC28.88■■■□□ 2.21
COL23A1Q86Y22 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL23A1Q86Y22 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 CDCA4P2-201ENST00000441182 718 ntBASIC28.87■■■□□ 2.21
COL23A1Q86Y22 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 AC010501.1-201ENST00000606270 1962 ntBASIC28.87■■■□□ 2.21
COL23A1Q86Y22 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
COL23A1Q86Y22 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC28.86■■■□□ 2.21
COL23A1Q86Y22 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
COL23A1Q86Y22 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.85■■■□□ 2.21
COL23A1Q86Y22 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC28.85■■■□□ 2.21
COL23A1Q86Y22 AC006015.1-201ENST00000429970 570 ntBASIC28.85■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms