Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS36Q86VN1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS36Q86VN1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS36Q86VN1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.35■■□□□ 1.49
VPS36Q86VN1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS36Q86VN1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS36Q86VN1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.35■■□□□ 1.49
VPS36Q86VN1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS36Q86VN1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.35■■□□□ 1.49
VPS36Q86VN1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
VPS36Q86VN1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
VPS36Q86VN1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
VPS36Q86VN1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
VPS36Q86VN1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
VPS36Q86VN1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS36Q86VN1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
VPS36Q86VN1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VPS36Q86VN1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.34■■□□□ 1.49
VPS36Q86VN1 DUSP8P3-201ENST00000399571 1760 ntBASIC24.34■■□□□ 1.49
VPS36Q86VN1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.33■■□□□ 1.49
VPS36Q86VN1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS36Q86VN1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.33■■□□□ 1.49
VPS36Q86VN1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC24.33■■□□□ 1.49
VPS36Q86VN1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS36Q86VN1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.33■■□□□ 1.49
VPS36Q86VN1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS36Q86VN1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
VPS36Q86VN1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.33■■□□□ 1.49
VPS36Q86VN1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS36Q86VN1 AC120024.1-201ENST00000562672 995 ntBASIC24.33■■□□□ 1.49
VPS36Q86VN1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.33■■□□□ 1.49
VPS36Q86VN1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
VPS36Q86VN1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
VPS36Q86VN1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
VPS36Q86VN1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
VPS36Q86VN1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
VPS36Q86VN1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.48
VPS36Q86VN1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VPS36Q86VN1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS36Q86VN1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
VPS36Q86VN1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VPS36Q86VN1 LBH-205ENST00000407930 756 ntTSL 2 BASIC24.32■■□□□ 1.48
VPS36Q86VN1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.32■■□□□ 1.48
VPS36Q86VN1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.32■■□□□ 1.48
VPS36Q86VN1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
VPS36Q86VN1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS36Q86VN1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VPS36Q86VN1 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS36Q86VN1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VPS36Q86VN1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
VPS36Q86VN1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
VPS36Q86VN1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC24.31■■□□□ 1.48
VPS36Q86VN1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
VPS36Q86VN1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
VPS36Q86VN1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
VPS36Q86VN1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
VPS36Q86VN1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
VPS36Q86VN1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.31■■□□□ 1.48
VPS36Q86VN1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.31■■□□□ 1.48
VPS36Q86VN1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
VPS36Q86VN1 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
VPS36Q86VN1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
VPS36Q86VN1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
VPS36Q86VN1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
VPS36Q86VN1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
VPS36Q86VN1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
VPS36Q86VN1 THA1P-201ENST00000590384 1145 ntBASIC24.3■■□□□ 1.48
VPS36Q86VN1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
VPS36Q86VN1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
VPS36Q86VN1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
VPS36Q86VN1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
VPS36Q86VN1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
VPS36Q86VN1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
VPS36Q86VN1 KRT18P24-201ENST00000344739 1156 ntBASIC24.29■■□□□ 1.48
VPS36Q86VN1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.29■■□□□ 1.48
VPS36Q86VN1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.29■■□□□ 1.48
VPS36Q86VN1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.29■■□□□ 1.48
VPS36Q86VN1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
VPS36Q86VN1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.29■■□□□ 1.48
VPS36Q86VN1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
VPS36Q86VN1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
VPS36Q86VN1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.29■■□□□ 1.48
VPS36Q86VN1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VPS36Q86VN1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VPS36Q86VN1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VPS36Q86VN1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.28■■□□□ 1.48
VPS36Q86VN1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
VPS36Q86VN1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
VPS36Q86VN1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
VPS36Q86VN1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
VPS36Q86VN1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
VPS36Q86VN1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
VPS36Q86VN1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.27■■□□□ 1.48
VPS36Q86VN1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
VPS36Q86VN1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
VPS36Q86VN1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
VPS36Q86VN1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VPS36Q86VN1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
VPS36Q86VN1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
VPS36Q86VN1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms