Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.24■■□□□ 1.47
DDX53Q86TM3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
DDX53Q86TM3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.24■■□□□ 1.47
DDX53Q86TM3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DDX53Q86TM3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX53Q86TM3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DDX53Q86TM3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX53Q86TM3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX53Q86TM3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX53Q86TM3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.24■■□□□ 1.47
DDX53Q86TM3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX53Q86TM3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX53Q86TM3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.24■■□□□ 1.47
DDX53Q86TM3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.24■■□□□ 1.47
DDX53Q86TM3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX53Q86TM3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.23■■□□□ 1.47
DDX53Q86TM3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
DDX53Q86TM3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.23■■□□□ 1.47
DDX53Q86TM3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX53Q86TM3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.23■■□□□ 1.47
DDX53Q86TM3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX53Q86TM3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
DDX53Q86TM3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX53Q86TM3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
DDX53Q86TM3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX53Q86TM3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.22■■□□□ 1.47
DDX53Q86TM3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.22■■□□□ 1.47
DDX53Q86TM3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
DDX53Q86TM3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX53Q86TM3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX53Q86TM3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX53Q86TM3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX53Q86TM3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX53Q86TM3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
DDX53Q86TM3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.21■■□□□ 1.47
DDX53Q86TM3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX53Q86TM3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX53Q86TM3 AL162430.1-201ENST00000480705 870 ntBASIC24.2■■□□□ 1.46
DDX53Q86TM3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DDX53Q86TM3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX53Q86TM3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX53Q86TM3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX53Q86TM3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX53Q86TM3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX53Q86TM3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
DDX53Q86TM3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
DDX53Q86TM3 ALDH1A3-203ENST00000557963 1670 ntBASIC24.19■■□□□ 1.46
DDX53Q86TM3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX53Q86TM3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX53Q86TM3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX53Q86TM3 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.18■■□□□ 1.46
DDX53Q86TM3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.18■■□□□ 1.46
DDX53Q86TM3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
DDX53Q86TM3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX53Q86TM3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
DDX53Q86TM3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
DDX53Q86TM3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.17■■□□□ 1.46
DDX53Q86TM3 pRNA.6-201ENST00000610482 90 ntBASIC24.17■■□□□ 1.46
DDX53Q86TM3 pRNA.5-201ENST00000612139 90 ntBASIC24.17■■□□□ 1.46
DDX53Q86TM3 pRNA.11-201ENST00000618423 90 ntBASIC24.17■■□□□ 1.46
DDX53Q86TM3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.17■■□□□ 1.46
DDX53Q86TM3 pRNA.13-201ENST00000619112 90 ntBASIC24.17■■□□□ 1.46
DDX53Q86TM3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX53Q86TM3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.16■■□□□ 1.46
DDX53Q86TM3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.16■■□□□ 1.46
DDX53Q86TM3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.16■■□□□ 1.46
DDX53Q86TM3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.16■■□□□ 1.46
DDX53Q86TM3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.16■■□□□ 1.46
DDX53Q86TM3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX53Q86TM3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX53Q86TM3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
DDX53Q86TM3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
DDX53Q86TM3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX53Q86TM3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.15■■□□□ 1.46
DDX53Q86TM3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
DDX53Q86TM3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
DDX53Q86TM3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX53Q86TM3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.15■■□□□ 1.46
DDX53Q86TM3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
DDX53Q86TM3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
DDX53Q86TM3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
DDX53Q86TM3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX53Q86TM3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
DDX53Q86TM3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.14■■□□□ 1.45
DDX53Q86TM3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.14■■□□□ 1.45
DDX53Q86TM3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.14■■□□□ 1.45
DDX53Q86TM3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
DDX53Q86TM3 AC141586.4-201ENST00000624558 1573 ntBASIC24.14■■□□□ 1.45
DDX53Q86TM3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.14■■□□□ 1.45
DDX53Q86TM3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.14■■□□□ 1.45
DDX53Q86TM3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX53Q86TM3 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.13■■□□□ 1.45
DDX53Q86TM3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.13■■□□□ 1.45
DDX53Q86TM3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
DDX53Q86TM3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DDX53Q86TM3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
DDX53Q86TM3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.12■■□□□ 1.45
DDX53Q86TM3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX53Q86TM3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX53Q86TM3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms