Protein–RNA interactions for Protein: Q7Z6B7

SRGAP1, SLIT-ROBO Rho GTPase-activating protein 1, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1Q7Z6B7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SRGAP1Q7Z6B7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.36■■□□□ 1.65
SRGAP1Q7Z6B7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.36■■□□□ 1.65
SRGAP1Q7Z6B7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.36■■□□□ 1.65
SRGAP1Q7Z6B7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
SRGAP1Q7Z6B7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SRGAP1Q7Z6B7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SRGAP1Q7Z6B7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.35■■□□□ 1.65
SRGAP1Q7Z6B7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
SRGAP1Q7Z6B7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SRGAP1Q7Z6B7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.34■■□□□ 1.65
SRGAP1Q7Z6B7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.34■■□□□ 1.65
SRGAP1Q7Z6B7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.34■■□□□ 1.65
SRGAP1Q7Z6B7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
SRGAP1Q7Z6B7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SRGAP1Q7Z6B7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SRGAP1Q7Z6B7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SRGAP1Q7Z6B7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SRGAP1Q7Z6B7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.34■■□□□ 1.65
SRGAP1Q7Z6B7 LINC00543-201ENST00000567234 1845 ntBASIC25.33■■□□□ 1.65
SRGAP1Q7Z6B7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SRGAP1Q7Z6B7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SRGAP1Q7Z6B7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SRGAP1Q7Z6B7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
SRGAP1Q7Z6B7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.33■■□□□ 1.65
SRGAP1Q7Z6B7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.33■■□□□ 1.65
SRGAP1Q7Z6B7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SRGAP1Q7Z6B7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.64
SRGAP1Q7Z6B7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
SRGAP1Q7Z6B7 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SRGAP1Q7Z6B7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC25.32■■□□□ 1.64
SRGAP1Q7Z6B7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
SRGAP1Q7Z6B7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SRGAP1Q7Z6B7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.32■■□□□ 1.64
SRGAP1Q7Z6B7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.32■■□□□ 1.64
SRGAP1Q7Z6B7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SRGAP1Q7Z6B7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.32■■□□□ 1.64
SRGAP1Q7Z6B7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SRGAP1Q7Z6B7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.32■■□□□ 1.64
SRGAP1Q7Z6B7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SRGAP1Q7Z6B7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.31■■□□□ 1.64
SRGAP1Q7Z6B7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SRGAP1Q7Z6B7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SRGAP1Q7Z6B7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SRGAP1Q7Z6B7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.31■■□□□ 1.64
SRGAP1Q7Z6B7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SRGAP1Q7Z6B7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.31■■□□□ 1.64
SRGAP1Q7Z6B7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SRGAP1Q7Z6B7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SRGAP1Q7Z6B7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SRGAP1Q7Z6B7 AL022069.1-201ENST00000568025 1636 ntBASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 AL136116.3-201ENST00000402907 1138 ntBASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 AL512631.2-201ENST00000604634 923 ntBASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
SRGAP1Q7Z6B7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.29■■□□□ 1.64
SRGAP1Q7Z6B7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
SRGAP1Q7Z6B7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SRGAP1Q7Z6B7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SRGAP1Q7Z6B7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 MIR4466-201ENST00000606121 54 ntBASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SRGAP1Q7Z6B7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.27■■□□□ 1.64
SRGAP1Q7Z6B7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SRGAP1Q7Z6B7 AC005703.6-201ENST00000623265 1329 ntBASIC25.27■■□□□ 1.64
SRGAP1Q7Z6B7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
SRGAP1Q7Z6B7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SRGAP1Q7Z6B7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SRGAP1Q7Z6B7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.26■■□□□ 1.63
SRGAP1Q7Z6B7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SRGAP1Q7Z6B7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SRGAP1Q7Z6B7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SRGAP1Q7Z6B7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SRGAP1Q7Z6B7 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.26■■□□□ 1.63
SRGAP1Q7Z6B7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
SRGAP1Q7Z6B7 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.26■■□□□ 1.63
SRGAP1Q7Z6B7 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms