Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
FAM53AQ6NSI3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
FAM53AQ6NSI3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
FAM53AQ6NSI3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
FAM53AQ6NSI3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.78■□□□□ 0.6
FAM53AQ6NSI3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM53AQ6NSI3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.78■□□□□ 0.6
FAM53AQ6NSI3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM53AQ6NSI3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM53AQ6NSI3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FAM53AQ6NSI3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.78■□□□□ 0.6
FAM53AQ6NSI3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM53AQ6NSI3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM53AQ6NSI3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
FAM53AQ6NSI3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM53AQ6NSI3 ALDH1A3-203ENST00000557963 1670 ntBASIC18.77■□□□□ 0.6
FAM53AQ6NSI3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.77■□□□□ 0.6
FAM53AQ6NSI3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.77■□□□□ 0.6
FAM53AQ6NSI3 YBX1P4-201ENST00000392794 808 ntBASIC18.77■□□□□ 0.6
FAM53AQ6NSI3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.77■□□□□ 0.6
FAM53AQ6NSI3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM53AQ6NSI3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
FAM53AQ6NSI3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.77■□□□□ 0.59
FAM53AQ6NSI3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
FAM53AQ6NSI3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM53AQ6NSI3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.76■□□□□ 0.59
FAM53AQ6NSI3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM53AQ6NSI3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
FAM53AQ6NSI3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM53AQ6NSI3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
FAM53AQ6NSI3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM53AQ6NSI3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FAM53AQ6NSI3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.76■□□□□ 0.59
FAM53AQ6NSI3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.76■□□□□ 0.59
FAM53AQ6NSI3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.76■□□□□ 0.59
FAM53AQ6NSI3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM53AQ6NSI3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FAM53AQ6NSI3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
FAM53AQ6NSI3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
FAM53AQ6NSI3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
FAM53AQ6NSI3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
FAM53AQ6NSI3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FAM53AQ6NSI3 AL161729.1-201ENST00000604104 1402 ntBASIC18.74■□□□□ 0.59
FAM53AQ6NSI3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FAM53AQ6NSI3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM53AQ6NSI3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM53AQ6NSI3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.74■□□□□ 0.59
FAM53AQ6NSI3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.74■□□□□ 0.59
FAM53AQ6NSI3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM53AQ6NSI3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.74■□□□□ 0.59
FAM53AQ6NSI3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FAM53AQ6NSI3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
FAM53AQ6NSI3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
FAM53AQ6NSI3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FAM53AQ6NSI3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.73■□□□□ 0.59
FAM53AQ6NSI3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FAM53AQ6NSI3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.73■□□□□ 0.59
FAM53AQ6NSI3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FAM53AQ6NSI3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FAM53AQ6NSI3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FAM53AQ6NSI3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FAM53AQ6NSI3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 AL031848.2-201ENST00000607670 837 ntBASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
FAM53AQ6NSI3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM53AQ6NSI3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM53AQ6NSI3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.71■□□□□ 0.59
FAM53AQ6NSI3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM53AQ6NSI3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FAM53AQ6NSI3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FAM53AQ6NSI3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM53AQ6NSI3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.71■□□□□ 0.59
FAM53AQ6NSI3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.71■□□□□ 0.59
FAM53AQ6NSI3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM53AQ6NSI3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM53AQ6NSI3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM53AQ6NSI3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FAM53AQ6NSI3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
FAM53AQ6NSI3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.7■□□□□ 0.58
FAM53AQ6NSI3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
FAM53AQ6NSI3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM53AQ6NSI3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM53AQ6NSI3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM53AQ6NSI3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM53AQ6NSI3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FAM53AQ6NSI3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.7■□□□□ 0.58
FAM53AQ6NSI3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.7■□□□□ 0.58
FAM53AQ6NSI3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms