Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CDCA8Q53HL2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CDCA8Q53HL2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.48■■■□□ 2.63
CDCA8Q53HL2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
CDCA8Q53HL2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CDCA8Q53HL2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CDCA8Q53HL2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC31.47■■■□□ 2.63
CDCA8Q53HL2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CDCA8Q53HL2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CDCA8Q53HL2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
CDCA8Q53HL2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CDCA8Q53HL2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC31.46■■■□□ 2.63
CDCA8Q53HL2 AC092171.4-201ENST00000609130 632 ntBASIC31.46■■■□□ 2.63
CDCA8Q53HL2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CDCA8Q53HL2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CDCA8Q53HL2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CDCA8Q53HL2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CDCA8Q53HL2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CDCA8Q53HL2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CDCA8Q53HL2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CDCA8Q53HL2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC31.45■■■□□ 2.62
CDCA8Q53HL2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CDCA8Q53HL2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
CDCA8Q53HL2 AC004812.2-201ENST00000611079 2094 ntBASIC31.44■■■□□ 2.62
CDCA8Q53HL2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC31.44■■■□□ 2.62
CDCA8Q53HL2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
CDCA8Q53HL2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
CDCA8Q53HL2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
CDCA8Q53HL2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CDCA8Q53HL2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.43■■■□□ 2.62
CDCA8Q53HL2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.43■■■□□ 2.62
CDCA8Q53HL2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CDCA8Q53HL2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC31.43■■■□□ 2.62
CDCA8Q53HL2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CDCA8Q53HL2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDCA8Q53HL2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDCA8Q53HL2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDCA8Q53HL2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CDCA8Q53HL2 DUX4L19-201ENST00000557448 1267 ntBASIC31.42■■■□□ 2.62
CDCA8Q53HL2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
CDCA8Q53HL2 AC241377.3-202ENST00000626088 1088 ntBASIC31.42■■■□□ 2.62
CDCA8Q53HL2 AC241585.3-202ENST00000628937 1088 ntBASIC31.42■■■□□ 2.62
CDCA8Q53HL2 AC245100.8-202ENST00000629247 1058 ntBASIC31.42■■■□□ 2.62
CDCA8Q53HL2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.42■■■□□ 2.62
CDCA8Q53HL2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDCA8Q53HL2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDCA8Q53HL2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDCA8Q53HL2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CDCA8Q53HL2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDCA8Q53HL2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CDCA8Q53HL2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDCA8Q53HL2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
CDCA8Q53HL2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CDCA8Q53HL2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC31.41■■■□□ 2.62
CDCA8Q53HL2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC31.41■■■□□ 2.62
CDCA8Q53HL2 AL139246.5-201ENST00000606645 996 ntBASIC31.41■■■□□ 2.62
CDCA8Q53HL2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC31.41■■■□□ 2.62
CDCA8Q53HL2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDCA8Q53HL2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
CDCA8Q53HL2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CDCA8Q53HL2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC31.4■■■□□ 2.62
CDCA8Q53HL2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC31.4■■■□□ 2.62
CDCA8Q53HL2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CDCA8Q53HL2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC31.39■■■□□ 2.62
CDCA8Q53HL2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
CDCA8Q53HL2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
CDCA8Q53HL2 AC096631.2-201ENST00000436136 790 ntBASIC31.38■■■□□ 2.61
CDCA8Q53HL2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC31.38■■■□□ 2.61
CDCA8Q53HL2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CDCA8Q53HL2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CDCA8Q53HL2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CDCA8Q53HL2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC31.37■■■□□ 2.61
CDCA8Q53HL2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
CDCA8Q53HL2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC31.37■■■□□ 2.61
CDCA8Q53HL2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
CDCA8Q53HL2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CDCA8Q53HL2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CDCA8Q53HL2 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC31.36■■■□□ 2.61
CDCA8Q53HL2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CDCA8Q53HL2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.36■■■□□ 2.61
CDCA8Q53HL2 AC110285.6-201ENST00000617652 491 ntBASIC31.36■■■□□ 2.61
CDCA8Q53HL2 SF1-220ENST00000626028 704 ntTSL 2 BASIC31.36■■■□□ 2.61
CDCA8Q53HL2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CDCA8Q53HL2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CDCA8Q53HL2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC31.35■■■□□ 2.61
CDCA8Q53HL2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CDCA8Q53HL2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDCA8Q53HL2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.35■■■□□ 2.61
CDCA8Q53HL2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
CDCA8Q53HL2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDCA8Q53HL2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDCA8Q53HL2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDCA8Q53HL2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDCA8Q53HL2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDCA8Q53HL2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC31.34■■■□□ 2.61
CDCA8Q53HL2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDCA8Q53HL2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CDCA8Q53HL2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CDCA8Q53HL2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CDCA8Q53HL2 AC099791.2-201ENST00000605725 427 ntBASIC31.33■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms