Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC01559Q495D7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01559Q495D7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
LINC01559Q495D7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LINC01559Q495D7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01559Q495D7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01559Q495D7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LINC01559Q495D7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01559Q495D7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01559Q495D7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.83■□□□□ 0.28
LINC01559Q495D7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.83■□□□□ 0.28
LINC01559Q495D7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.83■□□□□ 0.28
LINC01559Q495D7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.83■□□□□ 0.28
LINC01559Q495D7 LINC00526-201ENST00000581067 1875 ntBASIC16.83■□□□□ 0.28
LINC01559Q495D7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.83■□□□□ 0.28
LINC01559Q495D7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LINC01559Q495D7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LINC01559Q495D7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LINC01559Q495D7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LINC01559Q495D7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01559Q495D7 LINC00565-201ENST00000562710 2331 ntBASIC16.82■□□□□ 0.28
LINC01559Q495D7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
LINC01559Q495D7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01559Q495D7 GUSBP5-202ENST00000510805 1989 ntBASIC16.82■□□□□ 0.28
LINC01559Q495D7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01559Q495D7 AC127496.7-201ENST00000625110 1798 ntBASIC16.82■□□□□ 0.28
LINC01559Q495D7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01559Q495D7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01559Q495D7 MIR639-201ENST00000384974 98 ntBASIC16.82■□□□□ 0.28
LINC01559Q495D7 AC017007.3-201ENST00000479865 435 ntBASIC16.82■□□□□ 0.28
LINC01559Q495D7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01559Q495D7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01559Q495D7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01559Q495D7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01559Q495D7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LINC01559Q495D7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01559Q495D7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LINC01559Q495D7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01559Q495D7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
LINC01559Q495D7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.81■□□□□ 0.28
LINC01559Q495D7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01559Q495D7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.81■□□□□ 0.28
LINC01559Q495D7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LINC01559Q495D7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.81■□□□□ 0.28
LINC01559Q495D7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.81■□□□□ 0.28
LINC01559Q495D7 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC16.81■□□□□ 0.28
LINC01559Q495D7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.81■□□□□ 0.28
LINC01559Q495D7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01559Q495D7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01559Q495D7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01559Q495D7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01559Q495D7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.81■□□□□ 0.28
LINC01559Q495D7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LINC01559Q495D7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LINC01559Q495D7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01559Q495D7 ECEL1P1-201ENST00000373592 1742 ntBASIC16.8■□□□□ 0.28
LINC01559Q495D7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LINC01559Q495D7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01559Q495D7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
LINC01559Q495D7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LINC01559Q495D7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01559Q495D7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LINC01559Q495D7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01559Q495D7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01559Q495D7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
LINC01559Q495D7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LINC01559Q495D7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01559Q495D7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01559Q495D7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01559Q495D7 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01559Q495D7 AL592295.1-201ENST00000400984 884 ntBASIC16.79■□□□□ 0.28
LINC01559Q495D7 RPS2P7-201ENST00000447334 885 ntBASIC16.79■□□□□ 0.28
LINC01559Q495D7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.79■□□□□ 0.28
LINC01559Q495D7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01559Q495D7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01559Q495D7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01559Q495D7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01559Q495D7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01559Q495D7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
LINC01559Q495D7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01559Q495D7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LINC01559Q495D7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LINC01559Q495D7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01559Q495D7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01559Q495D7 AL022069.1-201ENST00000568025 1636 ntBASIC16.78■□□□□ 0.28
LINC01559Q495D7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.78■□□□□ 0.28
LINC01559Q495D7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01559Q495D7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01559Q495D7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC01559Q495D7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01559Q495D7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LINC01559Q495D7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01559Q495D7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01559Q495D7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC01559Q495D7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC01559Q495D7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01559Q495D7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01559Q495D7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01559Q495D7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC01559Q495D7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms