Protein–RNA interactions for Protein: Q3ZCT1

ZNF260, Zinc finger protein 260, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260Q3ZCT1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF260Q3ZCT1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF260Q3ZCT1 RNF126P1-201ENST00000567452 1320 ntBASIC19.3■□□□□ 0.68
ZNF260Q3ZCT1 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.3■□□□□ 0.68
ZNF260Q3ZCT1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF260Q3ZCT1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF260Q3ZCT1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF260Q3ZCT1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
ZNF260Q3ZCT1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF260Q3ZCT1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
ZNF260Q3ZCT1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF260Q3ZCT1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF260Q3ZCT1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ZNF260Q3ZCT1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF260Q3ZCT1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF260Q3ZCT1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF260Q3ZCT1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF260Q3ZCT1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF260Q3ZCT1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ZNF260Q3ZCT1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.29■□□□□ 0.68
ZNF260Q3ZCT1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.29■□□□□ 0.68
ZNF260Q3ZCT1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF260Q3ZCT1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF260Q3ZCT1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF260Q3ZCT1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF260Q3ZCT1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
ZNF260Q3ZCT1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ZNF260Q3ZCT1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF260Q3ZCT1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF260Q3ZCT1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF260Q3ZCT1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ZNF260Q3ZCT1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.28■□□□□ 0.68
ZNF260Q3ZCT1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF260Q3ZCT1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF260Q3ZCT1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF260Q3ZCT1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF260Q3ZCT1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF260Q3ZCT1 AC137767.1-201ENST00000602918 1920 ntBASIC19.27■□□□□ 0.68
ZNF260Q3ZCT1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF260Q3ZCT1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ZNF260Q3ZCT1 RPS2P7-201ENST00000447334 885 ntBASIC19.27■□□□□ 0.68
ZNF260Q3ZCT1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF260Q3ZCT1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ZNF260Q3ZCT1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF260Q3ZCT1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF260Q3ZCT1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF260Q3ZCT1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF260Q3ZCT1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF260Q3ZCT1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF260Q3ZCT1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
ZNF260Q3ZCT1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF260Q3ZCT1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 AC009831.1-201ENST00000580420 1582 ntBASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 AL592295.1-201ENST00000400984 884 ntBASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 ABHD17AP5-201ENST00000580133 923 ntBASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 AL022069.1-201ENST00000568025 1636 ntBASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF260Q3ZCT1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF260Q3ZCT1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF260Q3ZCT1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ZNF260Q3ZCT1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF260Q3ZCT1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF260Q3ZCT1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZNF260Q3ZCT1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.24■□□□□ 0.67
ZNF260Q3ZCT1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZNF260Q3ZCT1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF260Q3ZCT1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF260Q3ZCT1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF260Q3ZCT1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF260Q3ZCT1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF260Q3ZCT1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF260Q3ZCT1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF260Q3ZCT1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF260Q3ZCT1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
ZNF260Q3ZCT1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms