Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SHROOM1Q2M3G4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SHROOM1Q2M3G4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SHROOM1Q2M3G4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SHROOM1Q2M3G4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SHROOM1Q2M3G4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SHROOM1Q2M3G4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SHROOM1Q2M3G4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.72■■□□□ 1.87
SHROOM1Q2M3G4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.72■■□□□ 1.87
SHROOM1Q2M3G4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.72■■□□□ 1.87
SHROOM1Q2M3G4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.72■■□□□ 1.87
SHROOM1Q2M3G4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SHROOM1Q2M3G4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SHROOM1Q2M3G4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 AC091305.1-201ENST00000479476 895 ntBASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 AC008764.7-201ENST00000593779 1081 ntBASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 CA15P2-201ENST00000611168 834 ntBASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SHROOM1Q2M3G4 ALDH1A3-203ENST00000557963 1670 ntBASIC26.7■■□□□ 1.87
SHROOM1Q2M3G4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
SHROOM1Q2M3G4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SHROOM1Q2M3G4 MIR3181-201ENST00000578512 73 ntBASIC26.7■■□□□ 1.86
SHROOM1Q2M3G4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
SHROOM1Q2M3G4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SHROOM1Q2M3G4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SHROOM1Q2M3G4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
SHROOM1Q2M3G4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SHROOM1Q2M3G4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
SHROOM1Q2M3G4 AC011298.3-201ENST00000615796 283 ntBASIC26.69■■□□□ 1.86
SHROOM1Q2M3G4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHROOM1Q2M3G4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.68■■□□□ 1.86
SHROOM1Q2M3G4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.68■■□□□ 1.86
SHROOM1Q2M3G4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SHROOM1Q2M3G4 AC092171.4-201ENST00000609130 632 ntBASIC26.68■■□□□ 1.86
SHROOM1Q2M3G4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
SHROOM1Q2M3G4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SHROOM1Q2M3G4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
SHROOM1Q2M3G4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.68■■□□□ 1.86
SHROOM1Q2M3G4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SHROOM1Q2M3G4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHROOM1Q2M3G4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHROOM1Q2M3G4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.67■■□□□ 1.86
SHROOM1Q2M3G4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SHROOM1Q2M3G4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.67■■□□□ 1.86
SHROOM1Q2M3G4 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.67■■□□□ 1.86
SHROOM1Q2M3G4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.67■■□□□ 1.86
SHROOM1Q2M3G4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.67■■□□□ 1.86
SHROOM1Q2M3G4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.67■■□□□ 1.86
SHROOM1Q2M3G4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.67■■□□□ 1.86
SHROOM1Q2M3G4 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.67■■□□□ 1.86
SHROOM1Q2M3G4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SHROOM1Q2M3G4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SHROOM1Q2M3G4 AC099791.1-201ENST00000416440 715 ntBASIC26.66■■□□□ 1.86
SHROOM1Q2M3G4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.66■■□□□ 1.86
SHROOM1Q2M3G4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.66■■□□□ 1.86
SHROOM1Q2M3G4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.66■■□□□ 1.86
SHROOM1Q2M3G4 AC009086.3-201ENST00000623486 1008 ntBASIC26.66■■□□□ 1.86
SHROOM1Q2M3G4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SHROOM1Q2M3G4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.66■■□□□ 1.86
SHROOM1Q2M3G4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
SHROOM1Q2M3G4 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SHROOM1Q2M3G4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SHROOM1Q2M3G4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SHROOM1Q2M3G4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SHROOM1Q2M3G4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SHROOM1Q2M3G4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
SHROOM1Q2M3G4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SHROOM1Q2M3G4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
SHROOM1Q2M3G4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
SHROOM1Q2M3G4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SHROOM1Q2M3G4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SHROOM1Q2M3G4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SHROOM1Q2M3G4 RASA4CP-201ENST00000424092 1398 ntBASIC26.64■■□□□ 1.86
SHROOM1Q2M3G4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SHROOM1Q2M3G4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.64■■□□□ 1.86
SHROOM1Q2M3G4 AL138724.1-201ENST00000606771 1088 ntBASIC26.64■■□□□ 1.86
SHROOM1Q2M3G4 AC136469.2-201ENST00000623944 1028 ntBASIC26.64■■□□□ 1.86
SHROOM1Q2M3G4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.64■■□□□ 1.85
SHROOM1Q2M3G4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.64■■□□□ 1.85
SHROOM1Q2M3G4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.63■■□□□ 1.85
SHROOM1Q2M3G4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SHROOM1Q2M3G4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.63■■□□□ 1.85
SHROOM1Q2M3G4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SHROOM1Q2M3G4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SHROOM1Q2M3G4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SHROOM1Q2M3G4 AC020928.2-201ENST00000588717 2197 ntBASIC26.63■■□□□ 1.85
SHROOM1Q2M3G4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SHROOM1Q2M3G4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
SHROOM1Q2M3G4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SHROOM1Q2M3G4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms