Protein–RNA interactions for Protein: Q15599

SLC9A3R2, Na(+)/H(+) exchange regulatory cofactor NHE-RF2, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R2Q15599 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 KRT18P10-201ENST00000388836 1287 ntBASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 AL356441.2-201ENST00000443009 864 ntBASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 MIR6089-201ENST00000616698 64 ntBASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC9A3R2Q15599 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC9A3R2Q15599 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC9A3R2Q15599 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SLC9A3R2Q15599 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC9A3R2Q15599 Z92544.1-202ENST00000571933 1220 ntBASIC19.34■□□□□ 0.69
SLC9A3R2Q15599 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SLC9A3R2Q15599 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC9A3R2Q15599 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC9A3R2Q15599 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC9A3R2Q15599 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.33■□□□□ 0.69
SLC9A3R2Q15599 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SLC9A3R2Q15599 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
SLC9A3R2Q15599 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC9A3R2Q15599 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3R2Q15599 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC9A3R2Q15599 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.33■□□□□ 0.68
SLC9A3R2Q15599 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3R2Q15599 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3R2Q15599 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.33■□□□□ 0.68
SLC9A3R2Q15599 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SLC9A3R2Q15599 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3R2Q15599 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3R2Q15599 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
SLC9A3R2Q15599 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3R2Q15599 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3R2Q15599 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SLC9A3R2Q15599 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3R2Q15599 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3R2Q15599 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3R2Q15599 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3R2Q15599 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.32■□□□□ 0.68
SLC9A3R2Q15599 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3R2Q15599 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3R2Q15599 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3R2Q15599 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SLC9A3R2Q15599 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3R2Q15599 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3R2Q15599 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SLC9A3R2Q15599 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 HLA-L-211ENST00000482052 1765 ntBASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC9A3R2Q15599 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SLC9A3R2Q15599 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3R2Q15599 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3R2Q15599 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC9A3R2Q15599 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3R2Q15599 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3R2Q15599 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3R2Q15599 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3R2Q15599 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3R2Q15599 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC9A3R2Q15599 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 AC022616.5-201ENST00000518796 181 ntBASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC9A3R2Q15599 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms