Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 MIR4787-201ENST00000607364 84 ntBASIC21.35■■□□□ 1.01
RPP38P78345 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP38P78345 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP38P78345 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP38P78345 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP38P78345 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RPP38P78345 AC021242.3-201ENST00000607598 1377 ntBASIC21.35■■□□□ 1.01
RPP38P78345 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RPP38P78345 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.34■■□□□ 1.01
RPP38P78345 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPP38P78345 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPP38P78345 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPP38P78345 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.34■■□□□ 1.01
RPP38P78345 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.34■■□□□ 1.01
RPP38P78345 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RPP38P78345 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RPP38P78345 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPP38P78345 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.33■■□□□ 1.01
RPP38P78345 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.33■■□□□ 1.01
RPP38P78345 HLA-L-211ENST00000482052 1765 ntBASIC21.33■■□□□ 1.01
RPP38P78345 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.33■■□□□ 1.01
RPP38P78345 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RPP38P78345 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPP38P78345 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPP38P78345 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPP38P78345 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
RPP38P78345 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
RPP38P78345 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
RPP38P78345 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RPP38P78345 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.33■■□□□ 1.01
RPP38P78345 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.33■■□□□ 1.01
RPP38P78345 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RPP38P78345 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RPP38P78345 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.32■■□□□ 1
RPP38P78345 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPP38P78345 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.32■■□□□ 1
RPP38P78345 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RPP38P78345 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPP38P78345 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.32■■□□□ 1
RPP38P78345 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RPP38P78345 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RPP38P78345 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.32■■□□□ 1
RPP38P78345 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPP38P78345 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
RPP38P78345 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RPP38P78345 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
RPP38P78345 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RPP38P78345 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.31■■□□□ 1
RPP38P78345 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
RPP38P78345 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.31■■□□□ 1
RPP38P78345 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPP38P78345 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPP38P78345 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPP38P78345 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RPP38P78345 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.3■■□□□ 1
RPP38P78345 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.3■■□□□ 1
RPP38P78345 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPP38P78345 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.3■■□□□ 1
RPP38P78345 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.3■■□□□ 1
RPP38P78345 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPP38P78345 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
RPP38P78345 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.3■■□□□ 1
RPP38P78345 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RPP38P78345 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPP38P78345 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.29■■□□□ 1
RPP38P78345 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
RPP38P78345 AF131216.4-201ENST00000638924 1588 ntBASIC21.29■■□□□ 1
RPP38P78345 GUSBP5-201ENST00000418136 578 ntBASIC21.29■■□□□ 1
RPP38P78345 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RPP38P78345 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPP38P78345 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.29■■□□□ 1
RPP38P78345 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPP38P78345 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPP38P78345 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPP38P78345 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPP38P78345 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
RPP38P78345 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.28■■□□□ 1
RPP38P78345 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPP38P78345 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.28■■□□□ 1
RPP38P78345 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPP38P78345 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.28■■□□□ 1
RPP38P78345 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.27■■□□□ 1
RPP38P78345 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPP38P78345 AL117328.2-201ENST00000624617 1940 ntBASIC21.27■■□□□ 1
RPP38P78345 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPP38P78345 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPP38P78345 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPP38P78345 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPP38P78345 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RPP38P78345 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RPP38P78345 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.27■■□□□ 1
RPP38P78345 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RPP38P78345 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.27■■□□□ 1
RPP38P78345 AC092028.1-203ENST00000608262 953 ntBASIC21.27■■□□□ 1
RPP38P78345 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPP38P78345 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPP38P78345 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPP38P78345 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPP38P78345 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RPP38P78345 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms