Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.68■□□□□ 0.74
SEC61A1P61619 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.68■□□□□ 0.74
SEC61A1P61619 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEC61A1P61619 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEC61A1P61619 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEC61A1P61619 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEC61A1P61619 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEC61A1P61619 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEC61A1P61619 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.68■□□□□ 0.74
SEC61A1P61619 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEC61A1P61619 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SEC61A1P61619 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.67■□□□□ 0.74
SEC61A1P61619 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEC61A1P61619 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.67■□□□□ 0.74
SEC61A1P61619 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEC61A1P61619 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEC61A1P61619 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.67■□□□□ 0.74
SEC61A1P61619 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEC61A1P61619 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SEC61A1P61619 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEC61A1P61619 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEC61A1P61619 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.67■□□□□ 0.74
SEC61A1P61619 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SEC61A1P61619 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SEC61A1P61619 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SEC61A1P61619 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SEC61A1P61619 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.66■□□□□ 0.74
SEC61A1P61619 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEC61A1P61619 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEC61A1P61619 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEC61A1P61619 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEC61A1P61619 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEC61A1P61619 AL592295.1-201ENST00000400984 884 ntBASIC19.66■□□□□ 0.74
SEC61A1P61619 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.66■□□□□ 0.74
SEC61A1P61619 AC120024.1-201ENST00000562672 995 ntBASIC19.66■□□□□ 0.74
SEC61A1P61619 THA1P-201ENST00000590384 1145 ntBASIC19.66■□□□□ 0.74
SEC61A1P61619 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEC61A1P61619 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEC61A1P61619 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SEC61A1P61619 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SEC61A1P61619 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SEC61A1P61619 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEC61A1P61619 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEC61A1P61619 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEC61A1P61619 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.65■□□□□ 0.74
SEC61A1P61619 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEC61A1P61619 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SEC61A1P61619 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SEC61A1P61619 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SEC61A1P61619 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.65■□□□□ 0.74
SEC61A1P61619 EP400NL-214ENST00000641289 2402 ntBASIC19.65■□□□□ 0.74
SEC61A1P61619 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.64■□□□□ 0.74
SEC61A1P61619 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEC61A1P61619 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SEC61A1P61619 KRT18P24-201ENST00000344739 1156 ntBASIC19.64■□□□□ 0.73
SEC61A1P61619 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.64■□□□□ 0.73
SEC61A1P61619 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.64■□□□□ 0.73
SEC61A1P61619 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SEC61A1P61619 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.64■□□□□ 0.73
SEC61A1P61619 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SEC61A1P61619 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.64■□□□□ 0.73
SEC61A1P61619 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SEC61A1P61619 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SEC61A1P61619 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEC61A1P61619 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SEC61A1P61619 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SEC61A1P61619 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEC61A1P61619 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SEC61A1P61619 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SEC61A1P61619 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.63■□□□□ 0.73
SEC61A1P61619 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SEC61A1P61619 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.63■□□□□ 0.73
SEC61A1P61619 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SEC61A1P61619 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SEC61A1P61619 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SEC61A1P61619 ABCB10P4-201ENST00000566803 2184 ntBASIC19.63■□□□□ 0.73
SEC61A1P61619 FOXO3B-201ENST00000395675 1928 ntBASIC19.63■□□□□ 0.73
SEC61A1P61619 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEC61A1P61619 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.62■□□□□ 0.73
SEC61A1P61619 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEC61A1P61619 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEC61A1P61619 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEC61A1P61619 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEC61A1P61619 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEC61A1P61619 AC239859.2-201ENST00000444165 318 ntBASIC19.62■□□□□ 0.73
SEC61A1P61619 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SEC61A1P61619 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SEC61A1P61619 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SEC61A1P61619 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SEC61A1P61619 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SEC61A1P61619 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.62■□□□□ 0.73
SEC61A1P61619 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SEC61A1P61619 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SEC61A1P61619 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SEC61A1P61619 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEC61A1P61619 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SEC61A1P61619 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.61■□□□□ 0.73
SEC61A1P61619 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SEC61A1P61619 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.61■□□□□ 0.73
SEC61A1P61619 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms