Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPCS3P61009 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SPCS3P61009 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS3P61009 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS3P61009 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS3P61009 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SPCS3P61009 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS3P61009 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS3P61009 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SPCS3P61009 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.34■□□□□ 0.53
SPCS3P61009 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS3P61009 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS3P61009 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS3P61009 DUSP8P3-201ENST00000399571 1760 ntBASIC18.34■□□□□ 0.53
SPCS3P61009 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS3P61009 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS3P61009 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SPCS3P61009 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SPCS3P61009 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SPCS3P61009 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.34■□□□□ 0.53
SPCS3P61009 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.34■□□□□ 0.53
SPCS3P61009 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.34■□□□□ 0.53
SPCS3P61009 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.33■□□□□ 0.53
SPCS3P61009 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SPCS3P61009 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SPCS3P61009 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SPCS3P61009 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.33■□□□□ 0.52
SPCS3P61009 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.33■□□□□ 0.52
SPCS3P61009 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SPCS3P61009 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPCS3P61009 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPCS3P61009 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPCS3P61009 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SPCS3P61009 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SPCS3P61009 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SPCS3P61009 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPCS3P61009 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SPCS3P61009 AC087393.1-201ENST00000582896 145 ntBASIC18.32■□□□□ 0.52
SPCS3P61009 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SPCS3P61009 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SPCS3P61009 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPCS3P61009 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPCS3P61009 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SPCS3P61009 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SPCS3P61009 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.32■□□□□ 0.52
SPCS3P61009 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPCS3P61009 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPCS3P61009 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.31■□□□□ 0.52
SPCS3P61009 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPCS3P61009 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.31■□□□□ 0.52
SPCS3P61009 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPCS3P61009 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPCS3P61009 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPCS3P61009 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SPCS3P61009 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPCS3P61009 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPCS3P61009 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SPCS3P61009 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPCS3P61009 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.31■□□□□ 0.52
SPCS3P61009 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SPCS3P61009 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SPCS3P61009 AL022069.1-201ENST00000568025 1636 ntBASIC18.31■□□□□ 0.52
SPCS3P61009 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPCS3P61009 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPCS3P61009 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPCS3P61009 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPCS3P61009 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.3■□□□□ 0.52
SPCS3P61009 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.3■□□□□ 0.52
SPCS3P61009 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.3■□□□□ 0.52
SPCS3P61009 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SPCS3P61009 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.3■□□□□ 0.52
SPCS3P61009 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SPCS3P61009 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPCS3P61009 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPCS3P61009 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPCS3P61009 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SPCS3P61009 AC233723.2-201ENST00000623798 2106 ntBASIC18.29■□□□□ 0.52
SPCS3P61009 RNF126P1-201ENST00000567452 1320 ntBASIC18.29■□□□□ 0.52
SPCS3P61009 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.29■□□□□ 0.52
SPCS3P61009 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SPCS3P61009 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SPCS3P61009 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPCS3P61009 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SPCS3P61009 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.29■□□□□ 0.52
SPCS3P61009 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SPCS3P61009 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPCS3P61009 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPCS3P61009 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPCS3P61009 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SPCS3P61009 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SPCS3P61009 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPCS3P61009 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SPCS3P61009 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SPCS3P61009 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPCS3P61009 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPCS3P61009 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SPCS3P61009 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPCS3P61009 AL592293.1-201ENST00000502889 1188 ntBASIC18.27■□□□□ 0.52
SPCS3P61009 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SPCS3P61009 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms