Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
EIF4A1P60842 EDA-201ENST00000338901 1233 ntBASIC29.3■■■□□ 2.28
EIF4A1P60842 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
EIF4A1P60842 MIR935-201ENST00000401179 91 ntBASIC29.3■■■□□ 2.28
EIF4A1P60842 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC29.3■■■□□ 2.28
EIF4A1P60842 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
EIF4A1P60842 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
EIF4A1P60842 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
EIF4A1P60842 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
EIF4A1P60842 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
EIF4A1P60842 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
EIF4A1P60842 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.29■■■□□ 2.28
EIF4A1P60842 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
EIF4A1P60842 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
EIF4A1P60842 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
EIF4A1P60842 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
EIF4A1P60842 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC29.28■■■□□ 2.28
EIF4A1P60842 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
EIF4A1P60842 EBPL-204ENST00000378272 766 ntTSL 3 BASIC29.28■■■□□ 2.28
EIF4A1P60842 AC006455.2-201ENST00000429931 906 ntBASIC29.28■■■□□ 2.28
EIF4A1P60842 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC29.28■■■□□ 2.28
EIF4A1P60842 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
EIF4A1P60842 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
EIF4A1P60842 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
EIF4A1P60842 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
EIF4A1P60842 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
EIF4A1P60842 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
EIF4A1P60842 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
EIF4A1P60842 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
EIF4A1P60842 AC142381.2-201ENST00000566120 298 ntBASIC29.27■■■□□ 2.28
EIF4A1P60842 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC29.27■■■□□ 2.28
EIF4A1P60842 AL355001.2-201ENST00000620617 1191 ntBASIC29.27■■■□□ 2.28
EIF4A1P60842 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
EIF4A1P60842 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC29.27■■■□□ 2.28
EIF4A1P60842 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC29.27■■■□□ 2.28
EIF4A1P60842 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
EIF4A1P60842 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
EIF4A1P60842 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
EIF4A1P60842 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.26■■■□□ 2.27
EIF4A1P60842 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC29.26■■■□□ 2.27
EIF4A1P60842 VGF-203ENST00000611537 1622 ntTSL 5 BASIC29.26■■■□□ 2.27
EIF4A1P60842 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
EIF4A1P60842 EI24-213ENST00000618552 1747 ntTSL 5 BASIC29.25■■■□□ 2.27
EIF4A1P60842 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
EIF4A1P60842 MIR4767-201ENST00000582827 78 ntBASIC29.25■■■□□ 2.27
EIF4A1P60842 AC241377.3-202ENST00000626088 1088 ntBASIC29.25■■■□□ 2.27
EIF4A1P60842 AC241585.3-202ENST00000628937 1088 ntBASIC29.25■■■□□ 2.27
EIF4A1P60842 AC245100.8-202ENST00000629247 1058 ntBASIC29.25■■■□□ 2.27
EIF4A1P60842 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC29.25■■■□□ 2.27
EIF4A1P60842 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
EIF4A1P60842 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
EIF4A1P60842 AL136967.2-201ENST00000623968 743 ntBASIC29.24■■■□□ 2.27
EIF4A1P60842 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
EIF4A1P60842 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC29.24■■■□□ 2.27
EIF4A1P60842 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
EIF4A1P60842 ZNRF2P3-201ENST00000424200 374 ntBASIC29.23■■■□□ 2.27
EIF4A1P60842 GRAMD4P4-201ENST00000613563 1115 ntBASIC29.23■■■□□ 2.27
EIF4A1P60842 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
EIF4A1P60842 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.23■■■□□ 2.27
EIF4A1P60842 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC29.22■■■□□ 2.27
EIF4A1P60842 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
EIF4A1P60842 PTMA-205ENST00000410064 814 ntTSL 2 BASIC29.22■■■□□ 2.27
EIF4A1P60842 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.22■■■□□ 2.27
EIF4A1P60842 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.22■■■□□ 2.27
EIF4A1P60842 AL138724.1-201ENST00000606771 1088 ntBASIC29.22■■■□□ 2.27
EIF4A1P60842 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
EIF4A1P60842 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
EIF4A1P60842 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC29.21■■■□□ 2.27
EIF4A1P60842 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
EIF4A1P60842 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC29.21■■■□□ 2.27
EIF4A1P60842 AP001330.3-201ENST00000520123 633 ntBASIC29.21■■■□□ 2.27
EIF4A1P60842 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.21■■■□□ 2.27
EIF4A1P60842 AC011298.3-201ENST00000615796 283 ntBASIC29.21■■■□□ 2.27
EIF4A1P60842 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC29.21■■■□□ 2.27
EIF4A1P60842 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC29.2■■■□□ 2.27
EIF4A1P60842 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
EIF4A1P60842 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
EIF4A1P60842 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.27
EIF4A1P60842 MIR939-201ENST00000401314 82 ntBASIC29.2■■■□□ 2.26
EIF4A1P60842 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.2■■■□□ 2.26
EIF4A1P60842 AF213884.3-201ENST00000563833 479 ntBASIC29.2■■■□□ 2.26
EIF4A1P60842 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
EIF4A1P60842 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
EIF4A1P60842 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
EIF4A1P60842 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC29.19■■■□□ 2.26
EIF4A1P60842 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
EIF4A1P60842 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
EIF4A1P60842 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
EIF4A1P60842 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.19■■■□□ 2.26
EIF4A1P60842 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.19■■■□□ 2.26
EIF4A1P60842 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC29.19■■■□□ 2.26
EIF4A1P60842 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
EIF4A1P60842 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
EIF4A1P60842 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
EIF4A1P60842 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
EIF4A1P60842 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
EIF4A1P60842 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
EIF4A1P60842 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
EIF4A1P60842 MIR3181-201ENST00000578512 73 ntBASIC29.18■■■□□ 2.26
EIF4A1P60842 AC009086.3-201ENST00000623486 1008 ntBASIC29.18■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms