Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PDE1AP54750 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.83■■■□□ 2.05
PDE1AP54750 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PDE1AP54750 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PDE1AP54750 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PDE1AP54750 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PDE1AP54750 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.83■■■□□ 2.05
PDE1AP54750 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC27.83■■■□□ 2.05
PDE1AP54750 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.83■■■□□ 2.04
PDE1AP54750 NFE2L3P1-201ENST00000588207 1959 ntBASIC27.82■■■□□ 2.04
PDE1AP54750 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
PDE1AP54750 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
PDE1AP54750 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PDE1AP54750 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC27.82■■■□□ 2.04
PDE1AP54750 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
PDE1AP54750 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC27.82■■■□□ 2.04
PDE1AP54750 AC092028.1-203ENST00000608262 953 ntBASIC27.82■■■□□ 2.04
PDE1AP54750 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
PDE1AP54750 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PDE1AP54750 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.81■■■□□ 2.04
PDE1AP54750 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.81■■■□□ 2.04
PDE1AP54750 AC239859.2-201ENST00000444165 318 ntBASIC27.81■■■□□ 2.04
PDE1AP54750 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC27.81■■■□□ 2.04
PDE1AP54750 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PDE1AP54750 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
PDE1AP54750 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC27.81■■■□□ 2.04
PDE1AP54750 USF2-207ENST00000595068 1612 ntTSL 5 BASIC27.81■■■□□ 2.04
PDE1AP54750 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PDE1AP54750 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PDE1AP54750 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.8■■■□□ 2.04
PDE1AP54750 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
PDE1AP54750 MIR6722-201ENST00000617286 78 ntBASIC27.8■■■□□ 2.04
PDE1AP54750 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC27.8■■■□□ 2.04
PDE1AP54750 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.8■■■□□ 2.04
PDE1AP54750 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.8■■■□□ 2.04
PDE1AP54750 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PDE1AP54750 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
PDE1AP54750 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
PDE1AP54750 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
PDE1AP54750 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
PDE1AP54750 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
PDE1AP54750 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
PDE1AP54750 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
PDE1AP54750 AC092068.2-201ENST00000590491 1708 ntBASIC27.79■■■□□ 2.04
PDE1AP54750 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
PDE1AP54750 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
PDE1AP54750 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.79■■■□□ 2.04
PDE1AP54750 CLTA-206ENST00000466396 695 ntTSL 2 BASIC27.79■■■□□ 2.04
PDE1AP54750 KRT125P-201ENST00000546827 989 ntBASIC27.79■■■□□ 2.04
PDE1AP54750 MIR4787-201ENST00000607364 84 ntBASIC27.79■■■□□ 2.04
PDE1AP54750 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
PDE1AP54750 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
PDE1AP54750 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
PDE1AP54750 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.78■■■□□ 2.04
PDE1AP54750 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC27.78■■■□□ 2.04
PDE1AP54750 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC27.78■■■□□ 2.04
PDE1AP54750 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
PDE1AP54750 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PDE1AP54750 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
PDE1AP54750 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.78■■■□□ 2.04
PDE1AP54750 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.78■■■□□ 2.04
PDE1AP54750 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PDE1AP54750 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC27.77■■■□□ 2.04
PDE1AP54750 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC27.77■■■□□ 2.04
PDE1AP54750 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
PDE1AP54750 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
PDE1AP54750 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.77■■■□□ 2.04
PDE1AP54750 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
PDE1AP54750 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC27.76■■■□□ 2.03
PDE1AP54750 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
PDE1AP54750 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
PDE1AP54750 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PDE1AP54750 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PDE1AP54750 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC27.75■■■□□ 2.03
PDE1AP54750 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
PDE1AP54750 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
PDE1AP54750 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
PDE1AP54750 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
PDE1AP54750 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
PDE1AP54750 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
PDE1AP54750 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
PDE1AP54750 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
PDE1AP54750 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PDE1AP54750 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
PDE1AP54750 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDE1AP54750 LTK-203ENST00000453182 2412 ntTSL 2 BASIC27.73■■■□□ 2.03
PDE1AP54750 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC27.73■■■□□ 2.03
PDE1AP54750 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDE1AP54750 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDE1AP54750 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDE1AP54750 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
PDE1AP54750 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
PDE1AP54750 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PDE1AP54750 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PDE1AP54750 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PDE1AP54750 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PDE1AP54750 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
PDE1AP54750 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
PDE1AP54750 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC27.72■■■□□ 2.03
PDE1AP54750 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms