Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.31■■□□□ 1.8
LBX1P52954 WWOX-218ENST00000627394 894 ntTSL 5 BASIC26.31■■□□□ 1.8
LBX1P52954 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LBX1P52954 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LBX1P52954 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
LBX1P52954 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.3■■□□□ 1.8
LBX1P52954 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LBX1P52954 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LBX1P52954 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LBX1P52954 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.29■■□□□ 1.8
LBX1P52954 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LBX1P52954 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LBX1P52954 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.29■■□□□ 1.8
LBX1P52954 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
LBX1P52954 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
LBX1P52954 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
LBX1P52954 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
LBX1P52954 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
LBX1P52954 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.28■■□□□ 1.8
LBX1P52954 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LBX1P52954 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LBX1P52954 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
LBX1P52954 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LBX1P52954 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LBX1P52954 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.27■■□□□ 1.8
LBX1P52954 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
LBX1P52954 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LBX1P52954 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC26.27■■□□□ 1.8
LBX1P52954 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LBX1P52954 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LBX1P52954 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC26.26■■□□□ 1.79
LBX1P52954 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.26■■□□□ 1.79
LBX1P52954 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.26■■□□□ 1.79
LBX1P52954 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LBX1P52954 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LBX1P52954 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.25■■□□□ 1.79
LBX1P52954 AP004607.4-201ENST00000530158 1459 ntBASIC26.25■■□□□ 1.79
LBX1P52954 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LBX1P52954 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.25■■□□□ 1.79
LBX1P52954 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LBX1P52954 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LBX1P52954 AC011767.1-201ENST00000617410 1153 ntBASIC26.25■■□□□ 1.79
LBX1P52954 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.24■■□□□ 1.79
LBX1P52954 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.24■■□□□ 1.79
LBX1P52954 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC26.24■■□□□ 1.79
LBX1P52954 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.24■■□□□ 1.79
LBX1P52954 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.24■■□□□ 1.79
LBX1P52954 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LBX1P52954 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LBX1P52954 TSPY6P-201ENST00000448518 926 ntBASIC26.23■■□□□ 1.79
LBX1P52954 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.23■■□□□ 1.79
LBX1P52954 AL121832.2-201ENST00000610979 668 ntBASIC26.23■■□□□ 1.79
LBX1P52954 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.23■■□□□ 1.79
LBX1P52954 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.23■■□□□ 1.79
LBX1P52954 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LBX1P52954 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.23■■□□□ 1.79
LBX1P52954 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LBX1P52954 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
LBX1P52954 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LBX1P52954 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LBX1P52954 AC069152.1-201ENST00000438030 544 ntBASIC26.22■■□□□ 1.79
LBX1P52954 AC083906.2-201ENST00000511578 360 ntBASIC26.22■■□□□ 1.79
LBX1P52954 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.22■■□□□ 1.79
LBX1P52954 TBCB-214ENST00000629269 413 ntTSL 5 BASIC26.22■■□□□ 1.79
LBX1P52954 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
LBX1P52954 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.22■■□□□ 1.79
LBX1P52954 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
LBX1P52954 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
LBX1P52954 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC26.21■■□□□ 1.79
LBX1P52954 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.21■■□□□ 1.79
LBX1P52954 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.21■■□□□ 1.79
LBX1P52954 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
LBX1P52954 DRD5P2-201ENST00000421395 2012 ntBASIC26.21■■□□□ 1.79
LBX1P52954 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.2■■□□□ 1.78
LBX1P52954 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.2■■□□□ 1.78
LBX1P52954 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC26.2■■□□□ 1.78
LBX1P52954 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.2■■□□□ 1.78
LBX1P52954 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.2■■□□□ 1.78
LBX1P52954 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
LBX1P52954 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.2■■□□□ 1.78
LBX1P52954 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
LBX1P52954 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
LBX1P52954 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.2■■□□□ 1.78
LBX1P52954 AL138781.1-201ENST00000566567 1274 ntBASIC26.2■■□□□ 1.78
LBX1P52954 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC26.2■■□□□ 1.78
LBX1P52954 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.2■■□□□ 1.78
LBX1P52954 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LBX1P52954 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LBX1P52954 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LBX1P52954 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.2■■□□□ 1.78
LBX1P52954 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
LBX1P52954 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
LBX1P52954 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.19■■□□□ 1.78
LBX1P52954 KRT18P29-201ENST00000397031 1267 ntBASIC26.19■■□□□ 1.78
LBX1P52954 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
LBX1P52954 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.19■■□□□ 1.78
LBX1P52954 TPRG1LP1-201ENST00000598702 760 ntBASIC26.19■■□□□ 1.78
LBX1P52954 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.19■■□□□ 1.78
LBX1P52954 ITM2C-210ENST00000620962 501 ntBASIC26.19■■□□□ 1.78
LBX1P52954 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms