Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
CLCNKAP51800 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
CLCNKAP51800 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLCNKAP51800 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.26■■□□□ 1.15
CLCNKAP51800 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCNKAP51800 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCNKAP51800 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLCNKAP51800 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLCNKAP51800 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CLCNKAP51800 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCNKAP51800 SRD5A1P1-201ENST00000442297 786 ntBASIC22.25■■□□□ 1.15
CLCNKAP51800 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CLCNKAP51800 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.25■■□□□ 1.15
CLCNKAP51800 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCNKAP51800 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCNKAP51800 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCNKAP51800 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLCNKAP51800 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.25■■□□□ 1.15
CLCNKAP51800 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCNKAP51800 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.24■■□□□ 1.15
CLCNKAP51800 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.24■■□□□ 1.15
CLCNKAP51800 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCNKAP51800 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLCNKAP51800 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.24■■□□□ 1.15
CLCNKAP51800 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCNKAP51800 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCNKAP51800 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCNKAP51800 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.24■■□□□ 1.15
CLCNKAP51800 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCNKAP51800 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.24■■□□□ 1.15
CLCNKAP51800 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLCNKAP51800 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLCNKAP51800 AC004812.2-201ENST00000611079 2094 ntBASIC22.23■■□□□ 1.15
CLCNKAP51800 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CLCNKAP51800 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.23■■□□□ 1.15
CLCNKAP51800 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLCNKAP51800 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLCNKAP51800 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.23■■□□□ 1.15
CLCNKAP51800 AC009102.2-201ENST00000606772 1639 ntBASIC22.23■■□□□ 1.15
CLCNKAP51800 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CLCNKAP51800 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CLCNKAP51800 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.23■■□□□ 1.15
CLCNKAP51800 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLCNKAP51800 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.22■■□□□ 1.15
CLCNKAP51800 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.22■■□□□ 1.15
CLCNKAP51800 AL139246.5-201ENST00000606645 996 ntBASIC22.22■■□□□ 1.15
CLCNKAP51800 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLCNKAP51800 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CLCNKAP51800 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLCNKAP51800 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CLCNKAP51800 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLCNKAP51800 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLCNKAP51800 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.21■■□□□ 1.15
CLCNKAP51800 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.21■■□□□ 1.15
CLCNKAP51800 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLCNKAP51800 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLCNKAP51800 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLCNKAP51800 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.21■■□□□ 1.15
CLCNKAP51800 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLCNKAP51800 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLCNKAP51800 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CLCNKAP51800 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLCNKAP51800 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLCNKAP51800 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLCNKAP51800 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLCNKAP51800 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CLCNKAP51800 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.2■■□□□ 1.14
CLCNKAP51800 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.2■■□□□ 1.14
CLCNKAP51800 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CLCNKAP51800 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CLCNKAP51800 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CLCNKAP51800 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CLCNKAP51800 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.19■■□□□ 1.14
CLCNKAP51800 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CLCNKAP51800 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CLCNKAP51800 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CLCNKAP51800 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLCNKAP51800 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLCNKAP51800 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLCNKAP51800 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLCNKAP51800 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLCNKAP51800 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CLCNKAP51800 C17orf82-201ENST00000623772 1530 ntBASIC22.18■■□□□ 1.14
CLCNKAP51800 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CLCNKAP51800 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC22.18■■□□□ 1.14
CLCNKAP51800 AC092171.4-201ENST00000609130 632 ntBASIC22.18■■□□□ 1.14
CLCNKAP51800 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CLCNKAP51800 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CLCNKAP51800 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CLCNKAP51800 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCNKAP51800 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
CLCNKAP51800 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.17■■□□□ 1.14
CLCNKAP51800 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CLCNKAP51800 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.17■■□□□ 1.14
CLCNKAP51800 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.17■■□□□ 1.14
CLCNKAP51800 AC110285.6-201ENST00000617652 491 ntBASIC22.17■■□□□ 1.14
CLCNKAP51800 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLCNKAP51800 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.17■■□□□ 1.14
CLCNKAP51800 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.16■■□□□ 1.14
CLCNKAP51800 AC096631.2-201ENST00000436136 790 ntBASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms