Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	YLR157W-E	YLR157W-E	165 nt		5.34	□□□□□ -1.55
CAF16	P43569	YOL131W	YOL131W	327 nt		5.34	□□□□□ -1.55
CAF16	P43569	KTR1	YOR099W	1182 nt		5.34	□□□□□ -1.55
CAF16	P43569	IPP1	YBR011C	864 nt		5.34	□□□□□ -1.55
CAF16	P43569	YOR114W	YOR114W	885 nt		5.34	□□□□□ -1.55
CAF16	P43569	SFG1	YOR315W	1041 nt		5.34	□□□□□ -1.55
CAF16	P43569	TSL1	YML100W	3297 nt		5.34	□□□□□ -1.55
CAF16	P43569	TBF1	YPL128C	1689 nt		5.34	□□□□□ -1.56
CAF16	P43569	DRN1	YGR093W	1524 nt		5.33	□□□□□ -1.56
CAF16	P43569	TRP3	YKL211C	1455 nt		5.33	□□□□□ -1.56
CAF16	P43569	SAD1	YFR005C	1347 nt		5.33	□□□□□ -1.56
CAF16	P43569	ECM3	YOR092W	1842 nt		5.33	□□□□□ -1.56
CAF16	P43569	FAL1	YDR021W	1200 nt		5.33	□□□□□ -1.56
CAF16	P43569	COG7	YGL005C	840 nt		5.33	□□□□□ -1.56
CAF16	P43569	CMC1	YKL137W	336 nt		5.33	□□□□□ -1.56
CAF16	P43569	PCD1	YLR151C	1023 nt		5.33	□□□□□ -1.56
CAF16	P43569	SHE1	YBL031W	1017 nt		5.33	□□□□□ -1.56
CAF16	P43569	FIT2	YOR382W	462 nt		5.33	□□□□□ -1.56
CAF16	P43569	MDL1	YLR188W	2088 nt		5.33	□□□□□ -1.56
CAF16	P43569	SER3	YER081W	1410 nt		5.32	□□□□□ -1.56
CAF16	P43569	TEP1	YNL128W	1305 nt		5.32	□□□□□ -1.56
CAF16	P43569	YDL085C-A	YDL085C-A	207 nt		5.32	□□□□□ -1.56
CAF16	P43569	CBS2	YDR197W	1170 nt		5.32	□□□□□ -1.56
CAF16	P43569	TMT1	YER175C	900 nt		5.32	□□□□□ -1.56
CAF16	P43569	SEH1	YGL100W	1050 nt		5.32	□□□□□ -1.56
CAF16	P43569	MDE1	YJR024C	735 nt		5.32	□□□□□ -1.56
CAF16	P43569	CSM3	YMR048W	954 nt		5.32	□□□□□ -1.56
CAF16	P43569	GTO3	YMR251W	1101 nt		5.32	□□□□□ -1.56
CAF16	P43569	RPS3	YNL178W	723 nt		5.32	□□□□□ -1.56
CAF16	P43569	SPS19	YNL202W	879 nt		5.32	□□□□□ -1.56
CAF16	P43569	RRG9	YNL213C	645 nt		5.32	□□□□□ -1.56
CAF16	P43569	COS10	YNR075W	1125 nt		5.32	□□□□□ -1.56
CAF16	P43569	GRE1	YPL223C	507 nt		5.32	□□□□□ -1.56
CAF16	P43569	YPR027C	YPR027C	834 nt		5.32	□□□□□ -1.56
CAF16	P43569	HRP1	YOL123W	1605 nt		5.32	□□□□□ -1.56
CAF16	P43569	SCM3	YDL139C	672 nt		5.31	□□□□□ -1.56
CAF16	P43569	HAP2	YGL237C	798 nt		5.31	□□□□□ -1.56
CAF16	P43569	DRE2	YKR071C	1047 nt		5.31	□□□□□ -1.56
CAF16	P43569	GPN3	YLR243W	819 nt		5.31	□□□□□ -1.56
CAF16	P43569	VPS21	YOR089C	633 nt		5.31	□□□□□ -1.56
CAF16	P43569	PNO1	YOR145C	825 nt		5.31	□□□□□ -1.56
CAF16	P43569	LDH1	YBR204C	1128 nt		5.31	□□□□□ -1.56
CAF16	P43569	HRQ1	YDR291W	3234 nt		5.31	□□□□□ -1.56
CAF16	P43569	OXP1	YKL215C	3861 nt		5.31	□□□□□ -1.56
CAF16	P43569	CAB3	YKL088W	1716 nt		5.31	□□□□□ -1.56
CAF16	P43569	CEG1	YGL130W	1380 nt		5.3	□□□□□ -1.56
CAF16	P43569	SIA1	YOR137C	1869 nt		5.3	□□□□□ -1.56
CAF16	P43569	YFR032C-B	YFR032C-B	264 nt		5.3	□□□□□ -1.56
CAF16	P43569	YFR052C-A	YFR052C-A	306 nt		5.3	□□□□□ -1.56
CAF16	P43569	SPC2	YML055W	537 nt		5.3	□□□□□ -1.56
CAF16	P43569	PML39	YML107C	1005 nt		5.3	□□□□□ -1.56
CAF16	P43569	VPS1	YKR001C	2115 nt		5.29	□□□□□ -1.56
CAF16	P43569	VCX1	YDL128W	1236 nt		5.29	□□□□□ -1.56
CAF16	P43569	UBC5	YDR059C	447 nt		5.29	□□□□□ -1.56
CAF16	P43569	JLP1	YLL057C	1239 nt		5.29	□□□□□ -1.56
CAF16	P43569	RPL10	YLR075W	666 nt		5.29	□□□□□ -1.56
CAF16	P43569	TFS1	YLR178C	660 nt		5.29	□□□□□ -1.56
CAF16	P43569	IMD1	YAR073W	1212 nt		5.29	□□□□□ -1.56
CAF16	P43569	ERD2	YBL040C	660 nt		5.29	□□□□□ -1.56
CAF16	P43569	RUF23	RUF23	254 nt		5.29	□□□□□ -1.56
CAF16	P43569	YBL096C	YBL096C	309 nt		5.29	□□□□□ -1.56
CAF16	P43569	ENV9	YOR246C	993 nt		5.29	□□□□□ -1.56
CAF16	P43569	YPR076W	YPR076W	375 nt		5.29	□□□□□ -1.56
CAF16	P43569	ASH1	YKL185W	1767 nt		5.29	□□□□□ -1.56
CAF16	P43569	MCM4	YPR019W	2802 nt		5.29	□□□□□ -1.56
CAF16	P43569	YHK8	YHR048W	1545 nt		5.28	□□□□□ -1.56
CAF16	P43569	snR7-L	snR7-L	214 nt		5.28	□□□□□ -1.56
CAF16	P43569	YFL012W	YFL012W	447 nt		5.28	□□□□□ -1.56
CAF16	P43569	YGR122W	YGR122W	1209 nt		5.28	□□□□□ -1.56
CAF16	P43569	YLR156W	YLR156W	345 nt		5.28	□□□□□ -1.56
CAF16	P43569	YLR157W-D	YLR157W-D	213 nt		5.28	□□□□□ -1.56
CAF16	P43569	YLR159W	YLR159W	345 nt		5.28	□□□□□ -1.56
CAF16	P43569	YLR161W	YLR161W	345 nt		5.28	□□□□□ -1.56
CAF16	P43569	URA5	YML106W	681 nt		5.28	□□□□□ -1.56
CAF16	P43569	YMR245W	YMR245W	621 nt		5.28	□□□□□ -1.56
CAF16	P43569	FYV6	YNL133C	522 nt		5.28	□□□□□ -1.56
CAF16	P43569	CYC2	YOR037W	1101 nt		5.28	□□□□□ -1.56
CAF16	P43569	ERI1	YPL096C-A	207 nt		5.28	□□□□□ -1.56
CAF16	P43569	ARA1	YBR149W	1035 nt		5.28	□□□□□ -1.56
CAF16	P43569	RPS9B	YBR189W	588 nt		5.28	□□□□□ -1.56
CAF16	P43569	RFA1	YAR007C	1866 nt		5.28	□□□□□ -1.56
CAF16	P43569	ATP1	YBL099W	1638 nt		5.27	□□□□□ -1.57
CAF16	P43569	IMA3	YIL172C	1770 nt		5.27	□□□□□ -1.57
CAF16	P43569	IMA4	YJL221C	1770 nt		5.27	□□□□□ -1.57
CAF16	P43569	RDI1	YDL135C	609 nt		5.27	□□□□□ -1.57
CAF16	P43569	UGA1	YGR019W	1416 nt		5.27	□□□□□ -1.57
CAF16	P43569	LYS1	YIR034C	1122 nt		5.27	□□□□□ -1.57
CAF16	P43569	YKL077W	YKL077W	1179 nt		5.27	□□□□□ -1.57
CAF16	P43569	USB1	YLR132C	873 nt		5.27	□□□□□ -1.57
CAF16	P43569	CCS1	YMR038C	750 nt		5.27	□□□□□ -1.57
CAF16	P43569	RUF5-1	RUF5-1	710 nt		5.27	□□□□□ -1.57
CAF16	P43569	RUF5-2	RUF5-2	710 nt		5.27	□□□□□ -1.57
CAF16	P43569	YOL046C	YOL046C	675 nt		5.27	□□□□□ -1.57
CAF16	P43569	RBD2	YPL246C	789 nt		5.27	□□□□□ -1.57
CAF16	P43569	YPR071W	YPR071W	636 nt		5.27	□□□□□ -1.57
CAF16	P43569	SPP381	YBR152W	876 nt		5.27	□□□□□ -1.57
CAF16	P43569	Q0017	Q0017	162 nt		5.27	□□□□□ -1.57
CAF16	P43569	SUM1	YDR310C	3189 nt		5.27	□□□□□ -1.57
CAF16	P43569	YTP1	YNL237W	1380 nt		5.27	□□□□□ -1.57
CAF16	P43569	RPT2	YDL007W	1314 nt		5.26	□□□□□ -1.57

Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms