Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.29■■□□□ 1
SOX18P35713 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SOX18P35713 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.28■■□□□ 1
SOX18P35713 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.28■■□□□ 1
SOX18P35713 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SOX18P35713 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.28■■□□□ 1
SOX18P35713 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.28■■□□□ 1
SOX18P35713 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.28■■□□□ 1
SOX18P35713 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.28■■□□□ 1
SOX18P35713 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX18P35713 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
SOX18P35713 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SOX18P35713 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX18P35713 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX18P35713 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.27■■□□□ 1
SOX18P35713 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.27■■□□□ 1
SOX18P35713 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX18P35713 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX18P35713 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX18P35713 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
SOX18P35713 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX18P35713 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX18P35713 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SOX18P35713 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SOX18P35713 KRT125P-201ENST00000546827 989 ntBASIC21.26■□□□□ 0.99
SOX18P35713 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.26■□□□□ 0.99
SOX18P35713 MIR6722-201ENST00000617286 78 ntBASIC21.26■□□□□ 0.99
SOX18P35713 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.26■□□□□ 0.99
SOX18P35713 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX18P35713 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.26■□□□□ 0.99
SOX18P35713 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.26■□□□□ 0.99
SOX18P35713 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.25■□□□□ 0.99
SOX18P35713 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.25■□□□□ 0.99
SOX18P35713 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.25■□□□□ 0.99
SOX18P35713 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.25■□□□□ 0.99
SOX18P35713 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.25■□□□□ 0.99
SOX18P35713 UNC93B8-201ENST00000511903 705 ntBASIC21.25■□□□□ 0.99
SOX18P35713 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SOX18P35713 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX18P35713 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX18P35713 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SOX18P35713 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.24■□□□□ 0.99
SOX18P35713 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SOX18P35713 GUSBP5-201ENST00000418136 578 ntBASIC21.24■□□□□ 0.99
SOX18P35713 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SOX18P35713 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.24■□□□□ 0.99
SOX18P35713 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SOX18P35713 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SOX18P35713 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX18P35713 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX18P35713 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX18P35713 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX18P35713 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX18P35713 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SOX18P35713 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SOX18P35713 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX18P35713 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SOX18P35713 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX18P35713 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
SOX18P35713 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX18P35713 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX18P35713 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX18P35713 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SOX18P35713 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX18P35713 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.22■□□□□ 0.99
SOX18P35713 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.22■□□□□ 0.99
SOX18P35713 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX18P35713 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX18P35713 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.22■□□□□ 0.99
SOX18P35713 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.22■□□□□ 0.99
SOX18P35713 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SOX18P35713 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX18P35713 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX18P35713 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX18P35713 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.21■□□□□ 0.99
SOX18P35713 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SOX18P35713 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SOX18P35713 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX18P35713 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX18P35713 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SOX18P35713 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX18P35713 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.21■□□□□ 0.99
SOX18P35713 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX18P35713 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX18P35713 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.21■□□□□ 0.99
SOX18P35713 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.21■□□□□ 0.99
SOX18P35713 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SOX18P35713 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOX18P35713 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.2■□□□□ 0.98
SOX18P35713 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.2■□□□□ 0.98
SOX18P35713 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.2■□□□□ 0.98
SOX18P35713 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.2■□□□□ 0.98
SOX18P35713 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOX18P35713 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX18P35713 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX18P35713 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SOX18P35713 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX18P35713 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX18P35713 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.19■□□□□ 0.98
SOX18P35713 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms