Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC1P29353 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC1P29353 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC1P29353 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC1P29353 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.72■□□□□ 0.91
SHC1P29353 AL022069.1-201ENST00000568025 1636 ntBASIC20.71■□□□□ 0.91
SHC1P29353 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHC1P29353 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.71■□□□□ 0.91
SHC1P29353 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC1P29353 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC1P29353 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC1P29353 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
SHC1P29353 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SHC1P29353 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.71■□□□□ 0.91
SHC1P29353 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHC1P29353 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
SHC1P29353 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC1P29353 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC1P29353 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC1P29353 AC004448.1-201ENST00000458332 883 ntBASIC20.7■□□□□ 0.9
SHC1P29353 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SHC1P29353 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.7■□□□□ 0.9
SHC1P29353 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC1P29353 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.7■□□□□ 0.9
SHC1P29353 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SHC1P29353 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC1P29353 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.69■□□□□ 0.9
SHC1P29353 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC1P29353 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC1P29353 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC1P29353 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SHC1P29353 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC1P29353 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC1P29353 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC1P29353 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.68■□□□□ 0.9
SHC1P29353 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
SHC1P29353 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC1P29353 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SHC1P29353 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SHC1P29353 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SHC1P29353 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SHC1P29353 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC1P29353 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC1P29353 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC1P29353 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.67■□□□□ 0.9
SHC1P29353 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC1P29353 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.67■□□□□ 0.9
SHC1P29353 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.67■□□□□ 0.9
SHC1P29353 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.67■□□□□ 0.9
SHC1P29353 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC1P29353 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.67■□□□□ 0.9
SHC1P29353 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SHC1P29353 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SHC1P29353 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SHC1P29353 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC1P29353 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC1P29353 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SHC1P29353 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SHC1P29353 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHC1P29353 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC1P29353 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC1P29353 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC1P29353 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.66■□□□□ 0.9
SHC1P29353 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHC1P29353 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.66■□□□□ 0.9
SHC1P29353 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.66■□□□□ 0.9
SHC1P29353 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SHC1P29353 ABCB10P4-201ENST00000566803 2184 ntBASIC20.66■□□□□ 0.9
SHC1P29353 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.65■□□□□ 0.9
SHC1P29353 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC1P29353 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC1P29353 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SHC1P29353 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SHC1P29353 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.65■□□□□ 0.9
SHC1P29353 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.65■□□□□ 0.9
SHC1P29353 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.65■□□□□ 0.9
SHC1P29353 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.65■□□□□ 0.9
SHC1P29353 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC1P29353 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC1P29353 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.64■□□□□ 0.9
SHC1P29353 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHC1P29353 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SHC1P29353 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SHC1P29353 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC1P29353 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.64■□□□□ 0.89
SHC1P29353 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.64■□□□□ 0.89
SHC1P29353 MTDHP2-201ENST00000601468 714 ntBASIC20.64■□□□□ 0.89
SHC1P29353 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.64■□□□□ 0.89
SHC1P29353 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.64■□□□□ 0.89
SHC1P29353 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC1P29353 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC1P29353 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC1P29353 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SHC1P29353 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.63■□□□□ 0.89
SHC1P29353 AC010997.5-201ENST00000609182 354 ntBASIC20.63■□□□□ 0.89
SHC1P29353 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SHC1P29353 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC1P29353 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.63■□□□□ 0.89
SHC1P29353 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC1P29353 C9orf163-202ENST00000624034 2573 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms