Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF4P23510 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF4P23510 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF4P23510 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TNFSF4P23510 AL117332.1-201ENST00000622628 974 ntBASIC19.34■□□□□ 0.69
TNFSF4P23510 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TNFSF4P23510 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF4P23510 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF4P23510 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF4P23510 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.34■□□□□ 0.69
TNFSF4P23510 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF4P23510 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.34■□□□□ 0.69
TNFSF4P23510 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF4P23510 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TNFSF4P23510 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
TNFSF4P23510 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFSF4P23510 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TNFSF4P23510 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.33■□□□□ 0.69
TNFSF4P23510 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TNFSF4P23510 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.33■□□□□ 0.68
TNFSF4P23510 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.33■□□□□ 0.68
TNFSF4P23510 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.33■□□□□ 0.68
TNFSF4P23510 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.33■□□□□ 0.68
TNFSF4P23510 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.33■□□□□ 0.68
TNFSF4P23510 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TNFSF4P23510 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TNFSF4P23510 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.33■□□□□ 0.68
TNFSF4P23510 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF4P23510 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.32■□□□□ 0.68
TNFSF4P23510 MIR3621-201ENST00000580529 85 ntBASIC19.32■□□□□ 0.68
TNFSF4P23510 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TNFSF4P23510 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.32■□□□□ 0.68
TNFSF4P23510 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF4P23510 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF4P23510 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TNFSF4P23510 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF4P23510 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFSF4P23510 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.31■□□□□ 0.68
TNFSF4P23510 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF4P23510 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.31■□□□□ 0.68
TNFSF4P23510 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF4P23510 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TNFSF4P23510 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TNFSF4P23510 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
TNFSF4P23510 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF4P23510 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF4P23510 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TNFSF4P23510 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFSF4P23510 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFSF4P23510 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF4P23510 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF4P23510 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFSF4P23510 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFSF4P23510 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.3■□□□□ 0.68
TNFSF4P23510 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TNFSF4P23510 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF4P23510 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF4P23510 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TNFSF4P23510 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF4P23510 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TNFSF4P23510 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF4P23510 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.29■□□□□ 0.68
TNFSF4P23510 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF4P23510 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF4P23510 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TNFSF4P23510 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TNFSF4P23510 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF4P23510 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TNFSF4P23510 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.28■□□□□ 0.68
TNFSF4P23510 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.28■□□□□ 0.68
TNFSF4P23510 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF4P23510 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TNFSF4P23510 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF4P23510 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TNFSF4P23510 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFSF4P23510 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TNFSF4P23510 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFSF4P23510 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF4P23510 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF4P23510 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.27■□□□□ 0.68
TNFSF4P23510 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.27■□□□□ 0.68
TNFSF4P23510 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.27■□□□□ 0.68
TNFSF4P23510 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TNFSF4P23510 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.27■□□□□ 0.68
TNFSF4P23510 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.27■□□□□ 0.68
TNFSF4P23510 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.27■□□□□ 0.68
TNFSF4P23510 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF4P23510 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
TNFSF4P23510 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TNFSF4P23510 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TNFSF4P23510 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.27■□□□□ 0.67
TNFSF4P23510 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TNFSF4P23510 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TNFSF4P23510 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TNFSF4P23510 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF4P23510 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF4P23510 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF4P23510 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TNFSF4P23510 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.26■□□□□ 0.67
TNFSF4P23510 AC008406.3-201ENST00000620001 1374 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms