Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
KCNA3P22001 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
KCNA3P22001 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
KCNA3P22001 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.3■■■□□ 2.12
KCNA3P22001 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC28.29■■■□□ 2.12
KCNA3P22001 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC28.29■■■□□ 2.12
KCNA3P22001 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
KCNA3P22001 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.29■■■□□ 2.12
KCNA3P22001 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC28.29■■■□□ 2.12
KCNA3P22001 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
KCNA3P22001 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
KCNA3P22001 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
KCNA3P22001 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC28.28■■■□□ 2.12
KCNA3P22001 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
KCNA3P22001 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
KCNA3P22001 ABHD17AP1-201ENST00000358206 933 ntBASIC28.27■■■□□ 2.12
KCNA3P22001 EMC9-206ENST00000560403 872 ntTSL 2 BASIC28.27■■■□□ 2.12
KCNA3P22001 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.27■■■□□ 2.12
KCNA3P22001 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC28.27■■■□□ 2.12
KCNA3P22001 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC28.27■■■□□ 2.12
KCNA3P22001 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
KCNA3P22001 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.26■■■□□ 2.11
KCNA3P22001 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
KCNA3P22001 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.26■■■□□ 2.11
KCNA3P22001 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
KCNA3P22001 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
KCNA3P22001 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
KCNA3P22001 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
KCNA3P22001 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
KCNA3P22001 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC28.25■■■□□ 2.11
KCNA3P22001 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
KCNA3P22001 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC28.25■■■□□ 2.11
KCNA3P22001 AC080038.1-201ENST00000611274 1154 ntBASIC28.25■■■□□ 2.11
KCNA3P22001 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
KCNA3P22001 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
KCNA3P22001 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.25■■■□□ 2.11
KCNA3P22001 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
KCNA3P22001 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
KCNA3P22001 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC28.24■■■□□ 2.11
KCNA3P22001 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.24■■■□□ 2.11
KCNA3P22001 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
KCNA3P22001 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC28.24■■■□□ 2.11
KCNA3P22001 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
KCNA3P22001 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
KCNA3P22001 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
KCNA3P22001 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC28.24■■■□□ 2.11
KCNA3P22001 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC28.24■■■□□ 2.11
KCNA3P22001 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.24■■■□□ 2.11
KCNA3P22001 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
KCNA3P22001 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
KCNA3P22001 AL022069.1-201ENST00000568025 1636 ntBASIC28.23■■■□□ 2.11
KCNA3P22001 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC28.23■■■□□ 2.11
KCNA3P22001 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC28.23■■■□□ 2.11
KCNA3P22001 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC28.23■■■□□ 2.11
KCNA3P22001 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.23■■■□□ 2.11
KCNA3P22001 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC28.23■■■□□ 2.11
KCNA3P22001 KRT18P61-201ENST00000585825 1298 ntBASIC28.23■■■□□ 2.11
KCNA3P22001 GXYLT1P5-201ENST00000614548 1189 ntBASIC28.23■■■□□ 2.11
KCNA3P22001 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
KCNA3P22001 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.23■■■□□ 2.11
KCNA3P22001 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC28.22■■■□□ 2.11
KCNA3P22001 AC006015.1-201ENST00000429970 570 ntBASIC28.22■■■□□ 2.11
KCNA3P22001 CDCA4P2-201ENST00000441182 718 ntBASIC28.22■■■□□ 2.11
KCNA3P22001 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC28.22■■■□□ 2.11
KCNA3P22001 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC28.22■■■□□ 2.11
KCNA3P22001 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC28.22■■■□□ 2.11
KCNA3P22001 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC28.22■■■□□ 2.11
KCNA3P22001 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
KCNA3P22001 LINC02228-203ENST00000641970 1355 ntBASIC28.22■■■□□ 2.11
KCNA3P22001 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.21■■■□□ 2.11
KCNA3P22001 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
KCNA3P22001 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC28.21■■■□□ 2.11
KCNA3P22001 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
KCNA3P22001 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
KCNA3P22001 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
KCNA3P22001 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
KCNA3P22001 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
KCNA3P22001 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC28.21■■■□□ 2.11
KCNA3P22001 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC28.21■■■□□ 2.11
KCNA3P22001 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC28.21■■■□□ 2.11
KCNA3P22001 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC28.21■■■□□ 2.11
KCNA3P22001 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
KCNA3P22001 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
KCNA3P22001 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
KCNA3P22001 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
KCNA3P22001 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.11
KCNA3P22001 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
KCNA3P22001 AC010501.1-201ENST00000606270 1962 ntBASIC28.2■■■□□ 2.1
KCNA3P22001 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.2■■■□□ 2.1
KCNA3P22001 AC142086.6-201ENST00000621154 1765 ntBASIC28.19■■■□□ 2.1
KCNA3P22001 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC28.19■■■□□ 2.1
KCNA3P22001 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.19■■■□□ 2.1
KCNA3P22001 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28.18■■■□□ 2.1
KCNA3P22001 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
KCNA3P22001 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
KCNA3P22001 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
KCNA3P22001 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
KCNA3P22001 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
KCNA3P22001 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
KCNA3P22001 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms