Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC31.73■■■□□ 2.67
ATF3P18847 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.73■■■□□ 2.67
ATF3P18847 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ATF3P18847 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC31.72■■■□□ 2.67
ATF3P18847 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ATF3P18847 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC31.72■■■□□ 2.67
ATF3P18847 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC31.72■■■□□ 2.67
ATF3P18847 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
ATF3P18847 AC080038.1-201ENST00000611274 1154 ntBASIC31.72■■■□□ 2.67
ATF3P18847 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC31.72■■■□□ 2.67
ATF3P18847 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.72■■■□□ 2.67
ATF3P18847 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ATF3P18847 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
ATF3P18847 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
ATF3P18847 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC31.72■■■□□ 2.67
ATF3P18847 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
ATF3P18847 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ATF3P18847 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
ATF3P18847 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.7■■■□□ 2.67
ATF3P18847 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC31.7■■■□□ 2.67
ATF3P18847 ESRRAP2-201ENST00000418437 1549 ntBASIC31.7■■■□□ 2.67
ATF3P18847 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.67
ATF3P18847 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
ATF3P18847 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
ATF3P18847 GXYLT1P5-201ENST00000614548 1189 ntBASIC31.7■■■□□ 2.67
ATF3P18847 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.66
ATF3P18847 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
ATF3P18847 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
ATF3P18847 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC31.69■■■□□ 2.66
ATF3P18847 ABHD17AP1-201ENST00000358206 933 ntBASIC31.69■■■□□ 2.66
ATF3P18847 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC31.69■■■□□ 2.66
ATF3P18847 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
ATF3P18847 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
ATF3P18847 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
ATF3P18847 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
ATF3P18847 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ATF3P18847 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ATF3P18847 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC31.68■■■□□ 2.66
ATF3P18847 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
ATF3P18847 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
ATF3P18847 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC31.68■■■□□ 2.66
ATF3P18847 EMC9-206ENST00000560403 872 ntTSL 2 BASIC31.68■■■□□ 2.66
ATF3P18847 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC31.68■■■□□ 2.66
ATF3P18847 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC31.68■■■□□ 2.66
ATF3P18847 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.67■■■□□ 2.66
ATF3P18847 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
ATF3P18847 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC31.67■■■□□ 2.66
ATF3P18847 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC31.67■■■□□ 2.66
ATF3P18847 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC31.66■■■□□ 2.66
ATF3P18847 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
ATF3P18847 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC31.66■■■□□ 2.66
ATF3P18847 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC31.65■■■□□ 2.66
ATF3P18847 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
ATF3P18847 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC31.65■■■□□ 2.66
ATF3P18847 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ATF3P18847 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC31.65■■■□□ 2.66
ATF3P18847 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
ATF3P18847 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
ATF3P18847 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ATF3P18847 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
ATF3P18847 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
ATF3P18847 RAP2CP1-201ENST00000605103 478 ntBASIC31.64■■■□□ 2.66
ATF3P18847 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC31.64■■■□□ 2.66
ATF3P18847 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ATF3P18847 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
ATF3P18847 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC31.63■■■□□ 2.65
ATF3P18847 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
ATF3P18847 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC31.63■■■□□ 2.65
ATF3P18847 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ATF3P18847 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC31.63■■■□□ 2.65
ATF3P18847 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
ATF3P18847 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC31.62■■■□□ 2.65
ATF3P18847 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC31.62■■■□□ 2.65
ATF3P18847 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
ATF3P18847 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
ATF3P18847 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC31.62■■■□□ 2.65
ATF3P18847 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC31.62■■■□□ 2.65
ATF3P18847 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
ATF3P18847 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
ATF3P18847 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.61■■■□□ 2.65
ATF3P18847 AC006015.1-201ENST00000429970 570 ntBASIC31.61■■■□□ 2.65
ATF3P18847 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ATF3P18847 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
ATF3P18847 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ATF3P18847 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ATF3P18847 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ATF3P18847 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC31.6■■■□□ 2.65
ATF3P18847 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC31.6■■■□□ 2.65
ATF3P18847 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ATF3P18847 CDCA4P2-201ENST00000441182 718 ntBASIC31.6■■■□□ 2.65
ATF3P18847 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
ATF3P18847 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
ATF3P18847 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC31.6■■■□□ 2.65
ATF3P18847 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
ATF3P18847 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC31.59■■■□□ 2.65
ATF3P18847 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.59■■■□□ 2.65
ATF3P18847 AC010501.1-201ENST00000606270 1962 ntBASIC31.59■■■□□ 2.65
ATF3P18847 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC31.59■■■□□ 2.65
ATF3P18847 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
ATF3P18847 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms