Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CGB3P0DN86 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CGB3P0DN86 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.69■□□□□ 0.58
CGB3P0DN86 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGB3P0DN86 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CGB3P0DN86 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.69■□□□□ 0.58
CGB3P0DN86 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.69■□□□□ 0.58
CGB3P0DN86 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.69■□□□□ 0.58
CGB3P0DN86 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGB3P0DN86 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.69■□□□□ 0.58
CGB3P0DN86 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGB3P0DN86 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CGB3P0DN86 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CGB3P0DN86 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.69■□□□□ 0.58
CGB3P0DN86 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CGB3P0DN86 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGB3P0DN86 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CGB3P0DN86 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGB3P0DN86 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGB3P0DN86 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGB3P0DN86 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CGB3P0DN86 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.68■□□□□ 0.58
CGB3P0DN86 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.68■□□□□ 0.58
CGB3P0DN86 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGB3P0DN86 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGB3P0DN86 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CGB3P0DN86 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGB3P0DN86 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGB3P0DN86 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CGB3P0DN86 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CGB3P0DN86 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CGB3P0DN86 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CGB3P0DN86 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CGB3P0DN86 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGB3P0DN86 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.67■□□□□ 0.58
CGB3P0DN86 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.67■□□□□ 0.58
CGB3P0DN86 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.67■□□□□ 0.58
CGB3P0DN86 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.67■□□□□ 0.58
CGB3P0DN86 KRT125P-201ENST00000546827 989 ntBASIC18.67■□□□□ 0.58
CGB3P0DN86 MIR4787-201ENST00000607364 84 ntBASIC18.67■□□□□ 0.58
CGB3P0DN86 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CGB3P0DN86 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CGB3P0DN86 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGB3P0DN86 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CGB3P0DN86 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CGB3P0DN86 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.67■□□□□ 0.58
CGB3P0DN86 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CGB3P0DN86 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGB3P0DN86 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGB3P0DN86 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.66■□□□□ 0.58
CGB3P0DN86 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGB3P0DN86 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CGB3P0DN86 AC239859.2-201ENST00000444165 318 ntBASIC18.66■□□□□ 0.58
CGB3P0DN86 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.66■□□□□ 0.58
CGB3P0DN86 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGB3P0DN86 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGB3P0DN86 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGB3P0DN86 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGB3P0DN86 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGB3P0DN86 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.66■□□□□ 0.58
CGB3P0DN86 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGB3P0DN86 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CGB3P0DN86 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CGB3P0DN86 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.66■□□□□ 0.58
CGB3P0DN86 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.65■□□□□ 0.58
CGB3P0DN86 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CGB3P0DN86 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CGB3P0DN86 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGB3P0DN86 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CGB3P0DN86 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.65■□□□□ 0.58
CGB3P0DN86 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGB3P0DN86 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CGB3P0DN86 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CGB3P0DN86 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGB3P0DN86 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CGB3P0DN86 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.65■□□□□ 0.58
CGB3P0DN86 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.64■□□□□ 0.58
CGB3P0DN86 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CGB3P0DN86 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGB3P0DN86 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CGB3P0DN86 DUSP8P3-201ENST00000399571 1760 ntBASIC18.64■□□□□ 0.57
CGB3P0DN86 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGB3P0DN86 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CGB3P0DN86 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.64■□□□□ 0.57
CGB3P0DN86 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CGB3P0DN86 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGB3P0DN86 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CGB3P0DN86 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.64■□□□□ 0.57
CGB3P0DN86 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CGB3P0DN86 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.64■□□□□ 0.57
CGB3P0DN86 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CGB3P0DN86 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CGB3P0DN86 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.63■□□□□ 0.57
CGB3P0DN86 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGB3P0DN86 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CGB3P0DN86 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CGB3P0DN86 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CGB3P0DN86 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CGB3P0DN86 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CGB3P0DN86 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms