Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.99■□□□□ 0.79
ERCC1P07992 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC1P07992 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC1P07992 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ERCC1P07992 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ERCC1P07992 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC1P07992 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.98■□□□□ 0.79
ERCC1P07992 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC1P07992 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC1P07992 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.98■□□□□ 0.79
ERCC1P07992 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.98■□□□□ 0.79
ERCC1P07992 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ERCC1P07992 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC1P07992 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC1P07992 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ERCC1P07992 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC1P07992 AC021242.3-201ENST00000607598 1377 ntBASIC19.97■□□□□ 0.79
ERCC1P07992 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC1P07992 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.97■□□□□ 0.79
ERCC1P07992 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.97■□□□□ 0.79
ERCC1P07992 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.97■□□□□ 0.79
ERCC1P07992 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
ERCC1P07992 KRT16P3-201ENST00000439127 1283 ntBASIC19.97■□□□□ 0.79
ERCC1P07992 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.97■□□□□ 0.79
ERCC1P07992 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.97■□□□□ 0.79
ERCC1P07992 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.97■□□□□ 0.79
ERCC1P07992 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC1P07992 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC1P07992 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC1P07992 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ERCC1P07992 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
ERCC1P07992 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC1P07992 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.96■□□□□ 0.79
ERCC1P07992 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ERCC1P07992 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.96■□□□□ 0.79
ERCC1P07992 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC1P07992 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.96■□□□□ 0.79
ERCC1P07992 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.96■□□□□ 0.79
ERCC1P07992 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.96■□□□□ 0.79
ERCC1P07992 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC1P07992 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ERCC1P07992 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC1P07992 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.95■□□□□ 0.78
ERCC1P07992 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC1P07992 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC1P07992 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC1P07992 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC1P07992 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.95■□□□□ 0.78
ERCC1P07992 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC1P07992 TSPY9P-201ENST00000440215 945 ntBASIC19.95■□□□□ 0.78
ERCC1P07992 TSPY11P-201ENST00000442607 1045 ntBASIC19.95■□□□□ 0.78
ERCC1P07992 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC1P07992 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ERCC1P07992 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC1P07992 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC1P07992 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC1P07992 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.95■□□□□ 0.78
ERCC1P07992 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC1P07992 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.94■□□□□ 0.78
ERCC1P07992 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC1P07992 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.94■□□□□ 0.78
ERCC1P07992 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
ERCC1P07992 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC1P07992 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC1P07992 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC1P07992 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC1P07992 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC1P07992 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ERCC1P07992 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.93■□□□□ 0.78
ERCC1P07992 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ERCC1P07992 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ERCC1P07992 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ERCC1P07992 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.93■□□□□ 0.78
ERCC1P07992 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ERCC1P07992 AC092028.1-203ENST00000608262 953 ntBASIC19.93■□□□□ 0.78
ERCC1P07992 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ERCC1P07992 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ERCC1P07992 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ERCC1P07992 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ERCC1P07992 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.92■□□□□ 0.78
ERCC1P07992 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC1P07992 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.92■□□□□ 0.78
ERCC1P07992 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC1P07992 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC1P07992 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ERCC1P07992 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.92■□□□□ 0.78
ERCC1P07992 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC1P07992 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC1P07992 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
ERCC1P07992 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC1P07992 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC1P07992 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC1P07992 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ERCC1P07992 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.91■□□□□ 0.78
ERCC1P07992 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC1P07992 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.91■□□□□ 0.78
ERCC1P07992 MTDHP2-201ENST00000601468 714 ntBASIC19.91■□□□□ 0.78
ERCC1P07992 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC1P07992 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC1P07992 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms