Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN1P05114 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN1P05114 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
HMGN1P05114 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
HMGN1P05114 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN1P05114 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN1P05114 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.49■□□□□ 0.87
HMGN1P05114 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN1P05114 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN1P05114 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN1P05114 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGN1P05114 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
HMGN1P05114 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGN1P05114 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGN1P05114 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGN1P05114 LONRF2P2-201ENST00000439212 571 ntBASIC20.48■□□□□ 0.87
HMGN1P05114 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGN1P05114 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGN1P05114 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGN1P05114 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.48■□□□□ 0.87
HMGN1P05114 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HMGN1P05114 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN1P05114 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN1P05114 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.47■□□□□ 0.87
HMGN1P05114 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN1P05114 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.47■□□□□ 0.87
HMGN1P05114 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.47■□□□□ 0.87
HMGN1P05114 AC011551.1-201ENST00000614101 683 ntBASIC20.47■□□□□ 0.87
HMGN1P05114 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
HMGN1P05114 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
HMGN1P05114 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN1P05114 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.47■□□□□ 0.87
HMGN1P05114 ALDH1A3-203ENST00000557963 1670 ntBASIC20.47■□□□□ 0.87
HMGN1P05114 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGN1P05114 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HMGN1P05114 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGN1P05114 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGN1P05114 C1orf229-201ENST00000623686 2258 ntBASIC20.46■□□□□ 0.87
HMGN1P05114 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGN1P05114 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
HMGN1P05114 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
HMGN1P05114 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGN1P05114 DUX4L9-201ENST00000449051 1259 ntBASIC20.46■□□□□ 0.87
HMGN1P05114 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.46■□□□□ 0.87
HMGN1P05114 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGN1P05114 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HMGN1P05114 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.46■□□□□ 0.87
HMGN1P05114 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.45■□□□□ 0.87
HMGN1P05114 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
HMGN1P05114 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN1P05114 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN1P05114 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.45■□□□□ 0.86
HMGN1P05114 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HMGN1P05114 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.45■□□□□ 0.86
HMGN1P05114 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
HMGN1P05114 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN1P05114 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN1P05114 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN1P05114 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.44■□□□□ 0.86
HMGN1P05114 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN1P05114 PKD1P6-201ENST00000343738 4769 ntBASIC20.44■□□□□ 0.86
HMGN1P05114 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN1P05114 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HMGN1P05114 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN1P05114 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HMGN1P05114 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
HMGN1P05114 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HMGN1P05114 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.43■□□□□ 0.86
HMGN1P05114 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.43■□□□□ 0.86
HMGN1P05114 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN1P05114 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN1P05114 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN1P05114 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
HMGN1P05114 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN1P05114 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN1P05114 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN1P05114 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HMGN1P05114 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
HMGN1P05114 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HMGN1P05114 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HMGN1P05114 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
HMGN1P05114 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGN1P05114 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGN1P05114 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGN1P05114 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HMGN1P05114 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HMGN1P05114 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.42■□□□□ 0.86
HMGN1P05114 AC131274.2-201ENST00000580697 1507 ntBASIC20.42■□□□□ 0.86
HMGN1P05114 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
HMGN1P05114 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.41■□□□□ 0.86
HMGN1P05114 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGN1P05114 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGN1P05114 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGN1P05114 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGN1P05114 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGN1P05114 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.41■□□□□ 0.86
HMGN1P05114 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGN1P05114 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HMGN1P05114 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HMGN1P05114 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms