Protein–RNA interactions for Protein: P04183

TK1, Thymidine kinase, cytosolic, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TK1P04183 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TK1P04183 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TK1P04183 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TK1P04183 PKD1P6-201ENST00000343738 4769 ntBASIC19.23■□□□□ 0.67
TK1P04183 RARRES2P1-201ENST00000474487 481 ntBASIC19.23■□□□□ 0.67
TK1P04183 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TK1P04183 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TK1P04183 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TK1P04183 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TK1P04183 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TK1P04183 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TK1P04183 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.22■□□□□ 0.67
TK1P04183 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
TK1P04183 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TK1P04183 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.22■□□□□ 0.67
TK1P04183 AF131216.4-201ENST00000638924 1588 ntBASIC19.22■□□□□ 0.67
TK1P04183 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.22■□□□□ 0.67
TK1P04183 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TK1P04183 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TK1P04183 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TK1P04183 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.21■□□□□ 0.67
TK1P04183 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.21■□□□□ 0.67
TK1P04183 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
TK1P04183 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TK1P04183 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TK1P04183 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.21■□□□□ 0.67
TK1P04183 AL161729.1-201ENST00000604104 1402 ntBASIC19.21■□□□□ 0.67
TK1P04183 AL022069.1-201ENST00000568025 1636 ntBASIC19.21■□□□□ 0.67
TK1P04183 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TK1P04183 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TK1P04183 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TK1P04183 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.2■□□□□ 0.66
TK1P04183 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TK1P04183 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TK1P04183 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TK1P04183 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.2■□□□□ 0.66
TK1P04183 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.2■□□□□ 0.66
TK1P04183 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TK1P04183 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TK1P04183 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TK1P04183 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.19■□□□□ 0.66
TK1P04183 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.19■□□□□ 0.66
TK1P04183 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TK1P04183 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TK1P04183 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TK1P04183 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TK1P04183 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TK1P04183 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TK1P04183 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.19■□□□□ 0.66
TK1P04183 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TK1P04183 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TK1P04183 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TK1P04183 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TK1P04183 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TK1P04183 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TK1P04183 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.18■□□□□ 0.66
TK1P04183 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.18■□□□□ 0.66
TK1P04183 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TK1P04183 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TK1P04183 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TK1P04183 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TK1P04183 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TK1P04183 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TK1P04183 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TK1P04183 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TK1P04183 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TK1P04183 AC137630.3-201ENST00000607245 391 ntBASIC19.17■□□□□ 0.66
TK1P04183 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TK1P04183 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TK1P04183 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.17■□□□□ 0.66
TK1P04183 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TK1P04183 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TK1P04183 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TK1P04183 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TK1P04183 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TK1P04183 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TK1P04183 AC131274.2-201ENST00000580697 1507 ntBASIC19.16■□□□□ 0.66
TK1P04183 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TK1P04183 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.16■□□□□ 0.66
TK1P04183 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.16■□□□□ 0.66
TK1P04183 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TK1P04183 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.16■□□□□ 0.66
TK1P04183 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TK1P04183 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TK1P04183 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TK1P04183 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TK1P04183 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TK1P04183 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.15■□□□□ 0.66
TK1P04183 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TK1P04183 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TK1P04183 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.15■□□□□ 0.66
TK1P04183 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TK1P04183 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TK1P04183 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TK1P04183 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TK1P04183 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TK1P04183 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TK1P04183 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TK1P04183 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.14■□□□□ 0.65
TK1P04183 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms