Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-DQB1P01920 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HLA-DQB1P01920 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HLA-DQB1P01920 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQB1P01920 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQB1P01920 MIR3960-201ENST00000583311 91 ntBASIC19.65■□□□□ 0.74
HLA-DQB1P01920 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.65■□□□□ 0.74
HLA-DQB1P01920 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.65■□□□□ 0.74
HLA-DQB1P01920 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HLA-DQB1P01920 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.64■□□□□ 0.74
HLA-DQB1P01920 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.64■□□□□ 0.74
HLA-DQB1P01920 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DQB1P01920 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HLA-DQB1P01920 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB1P01920 AL157400.5-201ENST00000507624 621 ntBASIC19.64■□□□□ 0.73
HLA-DQB1P01920 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.64■□□□□ 0.73
HLA-DQB1P01920 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
HLA-DQB1P01920 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HLA-DQB1P01920 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB1P01920 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB1P01920 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB1P01920 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HLA-DQB1P01920 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HLA-DQB1P01920 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
HLA-DQB1P01920 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DQB1P01920 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB1P01920 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB1P01920 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB1P01920 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB1P01920 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HLA-DQB1P01920 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.62■□□□□ 0.73
HLA-DQB1P01920 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.62■□□□□ 0.73
HLA-DQB1P01920 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB1P01920 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HLA-DQB1P01920 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB1P01920 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HLA-DQB1P01920 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.61■□□□□ 0.73
HLA-DQB1P01920 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB1P01920 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB1P01920 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DQB1P01920 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DQB1P01920 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HLA-DQB1P01920 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.61■□□□□ 0.73
HLA-DQB1P01920 AC016575.1-201ENST00000607026 382 ntBASIC19.61■□□□□ 0.73
HLA-DQB1P01920 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-DQB1P01920 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DQB1P01920 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQB1P01920 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQB1P01920 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.6■□□□□ 0.73
HLA-DQB1P01920 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQB1P01920 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
HLA-DQB1P01920 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQB1P01920 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DQB1P01920 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQB1P01920 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.6■□□□□ 0.73
HLA-DQB1P01920 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
HLA-DQB1P01920 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DQB1P01920 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB1P01920 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB1P01920 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB1P01920 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB1P01920 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB1P01920 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DQB1P01920 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-DQB1P01920 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DQB1P01920 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.59■□□□□ 0.73
HLA-DQB1P01920 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB1P01920 C11orf96-202ENST00000528572 1834 ntBASIC19.59■□□□□ 0.73
HLA-DQB1P01920 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DQB1P01920 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.58■□□□□ 0.73
HLA-DQB1P01920 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.58■□□□□ 0.73
HLA-DQB1P01920 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.58■□□□□ 0.73
HLA-DQB1P01920 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.58■□□□□ 0.73
HLA-DQB1P01920 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.58■□□□□ 0.73
HLA-DQB1P01920 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.58■□□□□ 0.72
HLA-DQB1P01920 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.58■□□□□ 0.72
HLA-DQB1P01920 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HLA-DQB1P01920 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.58■□□□□ 0.72
HLA-DQB1P01920 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQB1P01920 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQB1P01920 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
HLA-DQB1P01920 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HLA-DQB1P01920 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DQB1P01920 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HLA-DQB1P01920 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
HLA-DQB1P01920 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.57■□□□□ 0.72
HLA-DQB1P01920 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms