Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DHFRP00374 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.57■□□□□ 0.72
DHFRP00374 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DHFRP00374 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DHFRP00374 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DHFRP00374 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DHFRP00374 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DHFRP00374 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DHFRP00374 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DHFRP00374 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
DHFRP00374 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.56■□□□□ 0.72
DHFRP00374 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DHFRP00374 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DHFRP00374 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DHFRP00374 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DHFRP00374 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
DHFRP00374 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DHFRP00374 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
DHFRP00374 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DHFRP00374 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DHFRP00374 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.55■□□□□ 0.72
DHFRP00374 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DHFRP00374 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DHFRP00374 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DHFRP00374 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
DHFRP00374 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
DHFRP00374 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DHFRP00374 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DHFRP00374 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DHFRP00374 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DHFRP00374 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DHFRP00374 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.54■□□□□ 0.72
DHFRP00374 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
DHFRP00374 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
DHFRP00374 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DHFRP00374 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DHFRP00374 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DHFRP00374 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.54■□□□□ 0.72
DHFRP00374 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.54■□□□□ 0.72
DHFRP00374 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DHFRP00374 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
DHFRP00374 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DHFRP00374 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DHFRP00374 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DHFRP00374 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
DHFRP00374 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
DHFRP00374 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.53■□□□□ 0.72
DHFRP00374 AC092068.2-201ENST00000590491 1708 ntBASIC19.53■□□□□ 0.72
DHFRP00374 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
DHFRP00374 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DHFRP00374 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
DHFRP00374 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
DHFRP00374 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.52■□□□□ 0.72
DHFRP00374 AC148477.6-201ENST00000623746 465 ntBASIC19.52■□□□□ 0.72
DHFRP00374 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DHFRP00374 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DHFRP00374 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
DHFRP00374 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
DHFRP00374 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
DHFRP00374 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.52■□□□□ 0.72
DHFRP00374 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
DHFRP00374 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DHFRP00374 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DHFRP00374 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
DHFRP00374 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.51■□□□□ 0.71
DHFRP00374 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DHFRP00374 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DHFRP00374 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.51■□□□□ 0.71
DHFRP00374 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
DHFRP00374 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
DHFRP00374 AC242852.2-201ENST00000615738 1807 ntBASIC19.51■□□□□ 0.71
DHFRP00374 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
DHFRP00374 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
DHFRP00374 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.5■□□□□ 0.71
DHFRP00374 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
DHFRP00374 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DHFRP00374 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.5■□□□□ 0.71
DHFRP00374 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
DHFRP00374 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DHFRP00374 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
DHFRP00374 AL359504.2-201ENST00000605506 1601 ntBASIC19.5■□□□□ 0.71
DHFRP00374 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.5■□□□□ 0.71
DHFRP00374 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
DHFRP00374 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.49■□□□□ 0.71
DHFRP00374 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.49■□□□□ 0.71
DHFRP00374 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
DHFRP00374 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.49■□□□□ 0.71
DHFRP00374 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
DHFRP00374 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
DHFRP00374 AL121603.2-201ENST00000557373 2117 ntBASIC19.49■□□□□ 0.71
DHFRP00374 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DHFRP00374 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DHFRP00374 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
DHFRP00374 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
DHFRP00374 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
DHFRP00374 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DHFRP00374 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
DHFRP00374 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
DHFRP00374 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.48■□□□□ 0.71
DHFRP00374 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms