Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.78■□□□□ 0.76
KDM4BO94953 AC087393.1-201ENST00000582896 145 ntBASIC19.78■□□□□ 0.76
KDM4BO94953 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.78■□□□□ 0.76
KDM4BO94953 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM4BO94953 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM4BO94953 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
KDM4BO94953 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM4BO94953 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
KDM4BO94953 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
KDM4BO94953 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDM4BO94953 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDM4BO94953 MIR6765-201ENST00000614092 87 ntBASIC19.77■□□□□ 0.76
KDM4BO94953 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDM4BO94953 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
KDM4BO94953 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM4BO94953 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM4BO94953 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM4BO94953 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM4BO94953 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
KDM4BO94953 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.76■□□□□ 0.75
KDM4BO94953 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
KDM4BO94953 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.76■□□□□ 0.75
KDM4BO94953 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.76■□□□□ 0.75
KDM4BO94953 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM4BO94953 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KDM4BO94953 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM4BO94953 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM4BO94953 EP400NL-214ENST00000641289 2402 ntBASIC19.76■□□□□ 0.75
KDM4BO94953 AC233723.2-201ENST00000623798 2106 ntBASIC19.76■□□□□ 0.75
KDM4BO94953 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDM4BO94953 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KDM4BO94953 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KDM4BO94953 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM4BO94953 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KDM4BO94953 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM4BO94953 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM4BO94953 DUX4L9-201ENST00000449051 1259 ntBASIC19.75■□□□□ 0.75
KDM4BO94953 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM4BO94953 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.75■□□□□ 0.75
KDM4BO94953 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
KDM4BO94953 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM4BO94953 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM4BO94953 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.75■□□□□ 0.75
KDM4BO94953 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KDM4BO94953 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDM4BO94953 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM4BO94953 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM4BO94953 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.74■□□□□ 0.75
KDM4BO94953 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KDM4BO94953 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
KDM4BO94953 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
KDM4BO94953 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM4BO94953 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.74■□□□□ 0.75
KDM4BO94953 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
KDM4BO94953 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KDM4BO94953 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.74■□□□□ 0.75
KDM4BO94953 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.74■□□□□ 0.75
KDM4BO94953 U85056.1-201ENST00000616429 682 ntBASIC19.74■□□□□ 0.75
KDM4BO94953 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM4BO94953 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
KDM4BO94953 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
KDM4BO94953 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM4BO94953 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDM4BO94953 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDM4BO94953 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDM4BO94953 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDM4BO94953 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.73■□□□□ 0.75
KDM4BO94953 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDM4BO94953 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KDM4BO94953 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDM4BO94953 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KDM4BO94953 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.73■□□□□ 0.75
KDM4BO94953 AL024507.2-201ENST00000606070 2574 ntBASIC19.73■□□□□ 0.75
KDM4BO94953 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
KDM4BO94953 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDM4BO94953 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDM4BO94953 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.72■□□□□ 0.75
KDM4BO94953 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KDM4BO94953 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.72■□□□□ 0.75
KDM4BO94953 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDM4BO94953 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
KDM4BO94953 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KDM4BO94953 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDM4BO94953 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDM4BO94953 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDM4BO94953 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.72■□□□□ 0.75
KDM4BO94953 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
KDM4BO94953 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
KDM4BO94953 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.72■□□□□ 0.75
KDM4BO94953 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KDM4BO94953 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.72■□□□□ 0.75
KDM4BO94953 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDM4BO94953 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDM4BO94953 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KDM4BO94953 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDM4BO94953 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KDM4BO94953 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KDM4BO94953 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.71■□□□□ 0.75
KDM4BO94953 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
KDM4BO94953 AL592295.1-201ENST00000400984 884 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms