Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.35■□□□□ 0.53
CLN5O75503 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLN5O75503 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CLN5O75503 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.34■□□□□ 0.53
CLN5O75503 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.34■□□□□ 0.53
CLN5O75503 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN5O75503 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN5O75503 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.34■□□□□ 0.53
CLN5O75503 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN5O75503 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN5O75503 AC007375.3-201ENST00000600936 2314 ntBASIC18.34■□□□□ 0.53
CLN5O75503 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.34■□□□□ 0.53
CLN5O75503 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN5O75503 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
CLN5O75503 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLN5O75503 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLN5O75503 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CLN5O75503 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLN5O75503 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLN5O75503 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
CLN5O75503 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLN5O75503 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLN5O75503 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CLN5O75503 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLN5O75503 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLN5O75503 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLN5O75503 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLN5O75503 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLN5O75503 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLN5O75503 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLN5O75503 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLN5O75503 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.32■□□□□ 0.52
CLN5O75503 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.32■□□□□ 0.52
CLN5O75503 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLN5O75503 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CLN5O75503 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLN5O75503 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CLN5O75503 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.32■□□□□ 0.52
CLN5O75503 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLN5O75503 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CLN5O75503 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLN5O75503 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLN5O75503 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLN5O75503 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLN5O75503 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLN5O75503 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLN5O75503 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
CLN5O75503 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLN5O75503 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLN5O75503 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CLN5O75503 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLN5O75503 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLN5O75503 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CLN5O75503 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLN5O75503 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLN5O75503 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLN5O75503 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLN5O75503 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLN5O75503 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLN5O75503 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLN5O75503 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLN5O75503 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.3■□□□□ 0.52
CLN5O75503 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLN5O75503 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLN5O75503 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CLN5O75503 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLN5O75503 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLN5O75503 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLN5O75503 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.29■□□□□ 0.52
CLN5O75503 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.29■□□□□ 0.52
CLN5O75503 AC133552.2-201ENST00000619106 1032 ntBASIC18.29■□□□□ 0.52
CLN5O75503 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.29■□□□□ 0.52
CLN5O75503 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLN5O75503 FOXO3B-201ENST00000395675 1928 ntBASIC18.29■□□□□ 0.52
CLN5O75503 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.29■□□□□ 0.52
CLN5O75503 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.28■□□□□ 0.52
CLN5O75503 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLN5O75503 RNF126P1-201ENST00000567452 1320 ntBASIC18.28■□□□□ 0.52
CLN5O75503 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLN5O75503 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLN5O75503 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLN5O75503 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLN5O75503 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLN5O75503 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.28■□□□□ 0.52
CLN5O75503 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.28■□□□□ 0.52
CLN5O75503 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.28■□□□□ 0.52
CLN5O75503 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLN5O75503 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLN5O75503 AC009831.1-201ENST00000580420 1582 ntBASIC18.28■□□□□ 0.52
CLN5O75503 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CLN5O75503 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLN5O75503 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLN5O75503 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLN5O75503 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLN5O75503 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLN5O75503 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLN5O75503 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLN5O75503 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.27■□□□□ 0.52
CLN5O75503 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.27■□□□□ 0.52
CLN5O75503 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms