Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.57■■□□□ 1.2
NDUFS3O75489 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
NDUFS3O75489 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.57■■□□□ 1.2
NDUFS3O75489 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.57■■□□□ 1.2
NDUFS3O75489 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NDUFS3O75489 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NDUFS3O75489 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NDUFS3O75489 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
NDUFS3O75489 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
NDUFS3O75489 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.56■■□□□ 1.2
NDUFS3O75489 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NDUFS3O75489 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
NDUFS3O75489 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.56■■□□□ 1.2
NDUFS3O75489 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NDUFS3O75489 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NDUFS3O75489 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
NDUFS3O75489 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
NDUFS3O75489 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.55■■□□□ 1.2
NDUFS3O75489 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NDUFS3O75489 DUSP8P5-201ENST00000422884 1815 ntBASIC22.55■■□□□ 1.2
NDUFS3O75489 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.55■■□□□ 1.2
NDUFS3O75489 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
NDUFS3O75489 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
NDUFS3O75489 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NDUFS3O75489 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NDUFS3O75489 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.55■■□□□ 1.2
NDUFS3O75489 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.55■■□□□ 1.2
NDUFS3O75489 Z92544.1-202ENST00000571933 1220 ntBASIC22.55■■□□□ 1.2
NDUFS3O75489 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NDUFS3O75489 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NDUFS3O75489 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
NDUFS3O75489 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.54■■□□□ 1.2
NDUFS3O75489 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NDUFS3O75489 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NDUFS3O75489 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.54■■□□□ 1.2
NDUFS3O75489 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.54■■□□□ 1.2
NDUFS3O75489 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NDUFS3O75489 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NDUFS3O75489 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NDUFS3O75489 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.54■■□□□ 1.2
NDUFS3O75489 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NDUFS3O75489 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
NDUFS3O75489 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NDUFS3O75489 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NDUFS3O75489 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NDUFS3O75489 ANOS2P-203ENST00000472227 1816 ntBASIC22.53■■□□□ 1.2
NDUFS3O75489 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NDUFS3O75489 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NDUFS3O75489 AC009299.2-201ENST00000482477 511 ntBASIC22.53■■□□□ 1.2
NDUFS3O75489 AL451085.2-201ENST00000605085 799 ntBASIC22.53■■□□□ 1.2
NDUFS3O75489 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.53■■□□□ 1.2
NDUFS3O75489 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.53■■□□□ 1.2
NDUFS3O75489 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
NDUFS3O75489 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NDUFS3O75489 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NDUFS3O75489 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.53■■□□□ 1.2
NDUFS3O75489 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NDUFS3O75489 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.53■■□□□ 1.2
NDUFS3O75489 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
NDUFS3O75489 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NDUFS3O75489 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NDUFS3O75489 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
NDUFS3O75489 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NDUFS3O75489 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NDUFS3O75489 AC239859.2-201ENST00000444165 318 ntBASIC22.52■■□□□ 1.2
NDUFS3O75489 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.52■■□□□ 1.2
NDUFS3O75489 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
NDUFS3O75489 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.52■■□□□ 1.2
NDUFS3O75489 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
NDUFS3O75489 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NDUFS3O75489 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
NDUFS3O75489 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
NDUFS3O75489 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
NDUFS3O75489 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NDUFS3O75489 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NDUFS3O75489 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NDUFS3O75489 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NDUFS3O75489 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
NDUFS3O75489 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
NDUFS3O75489 AC092028.1-203ENST00000608262 953 ntBASIC22.51■■□□□ 1.19
NDUFS3O75489 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
NDUFS3O75489 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NDUFS3O75489 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.5■■□□□ 1.19
NDUFS3O75489 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS3O75489 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS3O75489 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.5■■□□□ 1.19
NDUFS3O75489 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS3O75489 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.5■■□□□ 1.19
NDUFS3O75489 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
NDUFS3O75489 MIR4787-201ENST00000607364 84 ntBASIC22.5■■□□□ 1.19
NDUFS3O75489 MIR6722-201ENST00000617286 78 ntBASIC22.5■■□□□ 1.19
NDUFS3O75489 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.5■■□□□ 1.19
NDUFS3O75489 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS3O75489 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.5■■□□□ 1.19
NDUFS3O75489 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS3O75489 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS3O75489 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS3O75489 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NDUFS3O75489 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NDUFS3O75489 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms