Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF253O75346 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.53■□□□□ 0.4
ZNF253O75346 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.53■□□□□ 0.4
ZNF253O75346 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF253O75346 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF253O75346 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
ZNF253O75346 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF253O75346 MIR4449-201ENST00000578365 66 ntBASIC17.53■□□□□ 0.4
ZNF253O75346 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF253O75346 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF253O75346 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF253O75346 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ZNF253O75346 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ZNF253O75346 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF253O75346 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
ZNF253O75346 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF253O75346 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF253O75346 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF253O75346 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
ZNF253O75346 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF253O75346 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ZNF253O75346 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.52■□□□□ 0.4
ZNF253O75346 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF253O75346 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.52■□□□□ 0.39
ZNF253O75346 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
ZNF253O75346 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF253O75346 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ZNF253O75346 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF253O75346 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
ZNF253O75346 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF253O75346 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF253O75346 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF253O75346 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.51■□□□□ 0.39
ZNF253O75346 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF253O75346 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF253O75346 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.51■□□□□ 0.39
ZNF253O75346 AC009831.1-201ENST00000580420 1582 ntBASIC17.51■□□□□ 0.39
ZNF253O75346 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.51■□□□□ 0.39
ZNF253O75346 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF253O75346 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.51■□□□□ 0.39
ZNF253O75346 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ZNF253O75346 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ZNF253O75346 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF253O75346 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.51■□□□□ 0.39
ZNF253O75346 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF253O75346 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ZNF253O75346 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ZNF253O75346 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF253O75346 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF253O75346 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.5■□□□□ 0.39
ZNF253O75346 AC233723.2-201ENST00000623798 2106 ntBASIC17.5■□□□□ 0.39
ZNF253O75346 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF253O75346 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF253O75346 RPS2P7-201ENST00000447334 885 ntBASIC17.5■□□□□ 0.39
ZNF253O75346 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
ZNF253O75346 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ZNF253O75346 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF253O75346 SLC25A24-204ENST00000569674 2357 ntBASIC17.5■□□□□ 0.39
ZNF253O75346 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.5■□□□□ 0.39
ZNF253O75346 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ZNF253O75346 AC090877.2-201ENST00000558441 1738 ntBASIC17.5■□□□□ 0.39
ZNF253O75346 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.49■□□□□ 0.39
ZNF253O75346 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.49■□□□□ 0.39
ZNF253O75346 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.49■□□□□ 0.39
ZNF253O75346 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.49■□□□□ 0.39
ZNF253O75346 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF253O75346 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF253O75346 AC133552.2-201ENST00000619106 1032 ntBASIC17.49■□□□□ 0.39
ZNF253O75346 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
ZNF253O75346 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.49■□□□□ 0.39
ZNF253O75346 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF253O75346 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF253O75346 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF253O75346 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF253O75346 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ZNF253O75346 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
ZNF253O75346 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF253O75346 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF253O75346 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.48■□□□□ 0.39
ZNF253O75346 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF253O75346 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ZNF253O75346 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.48■□□□□ 0.39
ZNF253O75346 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF253O75346 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF253O75346 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
ZNF253O75346 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ZNF253O75346 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.48■□□□□ 0.39
ZNF253O75346 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF253O75346 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ZNF253O75346 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ZNF253O75346 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF253O75346 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF253O75346 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF253O75346 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF253O75346 AL592295.1-201ENST00000400984 884 ntBASIC17.47■□□□□ 0.39
ZNF253O75346 AC018755.3-202ENST00000596210 929 ntBASIC17.47■□□□□ 0.39
ZNF253O75346 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF253O75346 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF253O75346 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF253O75346 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms