Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
PFDN1O60925 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PFDN1O60925 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
PFDN1O60925 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PFDN1O60925 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
PFDN1O60925 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN1O60925 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN1O60925 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN1O60925 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN1O60925 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN1O60925 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.39■□□□□ 0.85
PFDN1O60925 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PFDN1O60925 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
PFDN1O60925 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PFDN1O60925 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PFDN1O60925 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PFDN1O60925 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.38■□□□□ 0.85
PFDN1O60925 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PFDN1O60925 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.38■□□□□ 0.85
PFDN1O60925 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PFDN1O60925 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.38■□□□□ 0.85
PFDN1O60925 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PFDN1O60925 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PFDN1O60925 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.37■□□□□ 0.85
PFDN1O60925 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.37■□□□□ 0.85
PFDN1O60925 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.37■□□□□ 0.85
PFDN1O60925 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PFDN1O60925 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN1O60925 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.37■□□□□ 0.85
PFDN1O60925 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN1O60925 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
PFDN1O60925 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PFDN1O60925 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN1O60925 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PFDN1O60925 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN1O60925 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN1O60925 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PFDN1O60925 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN1O60925 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN1O60925 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN1O60925 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN1O60925 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.36■□□□□ 0.85
PFDN1O60925 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
PFDN1O60925 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PFDN1O60925 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
PFDN1O60925 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.36■□□□□ 0.85
PFDN1O60925 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PFDN1O60925 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.35■□□□□ 0.85
PFDN1O60925 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PFDN1O60925 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PFDN1O60925 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PFDN1O60925 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.35■□□□□ 0.85
PFDN1O60925 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PFDN1O60925 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PFDN1O60925 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PFDN1O60925 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PFDN1O60925 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
PFDN1O60925 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.35■□□□□ 0.85
PFDN1O60925 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PFDN1O60925 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PFDN1O60925 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PFDN1O60925 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PFDN1O60925 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PFDN1O60925 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.34■□□□□ 0.85
PFDN1O60925 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PFDN1O60925 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PFDN1O60925 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.34■□□□□ 0.85
PFDN1O60925 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PFDN1O60925 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.33■□□□□ 0.85
PFDN1O60925 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PFDN1O60925 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PFDN1O60925 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PFDN1O60925 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PFDN1O60925 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PFDN1O60925 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.33■□□□□ 0.84
PFDN1O60925 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.33■□□□□ 0.84
PFDN1O60925 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PFDN1O60925 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PFDN1O60925 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PFDN1O60925 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PFDN1O60925 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PFDN1O60925 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PFDN1O60925 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PFDN1O60925 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PFDN1O60925 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PFDN1O60925 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PFDN1O60925 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PFDN1O60925 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PFDN1O60925 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PFDN1O60925 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PFDN1O60925 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
PFDN1O60925 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.31■□□□□ 0.84
PFDN1O60925 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PFDN1O60925 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PFDN1O60925 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PFDN1O60925 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PFDN1O60925 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PFDN1O60925 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PFDN1O60925 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PFDN1O60925 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms