Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.29■■□□□ 1
PLOD3O60568 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PLOD3O60568 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.29■■□□□ 1
PLOD3O60568 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PLOD3O60568 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PLOD3O60568 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PLOD3O60568 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.28■■□□□ 1
PLOD3O60568 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.28■■□□□ 1
PLOD3O60568 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.28■■□□□ 1
PLOD3O60568 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PLOD3O60568 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PLOD3O60568 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PLOD3O60568 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.28■■□□□ 1
PLOD3O60568 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PLOD3O60568 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PLOD3O60568 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.28■■□□□ 1
PLOD3O60568 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PLOD3O60568 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.28■■□□□ 1
PLOD3O60568 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
PLOD3O60568 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PLOD3O60568 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.27■□□□□ 0.99
PLOD3O60568 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PLOD3O60568 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.27■□□□□ 0.99
PLOD3O60568 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PLOD3O60568 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PLOD3O60568 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PLOD3O60568 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.26■□□□□ 0.99
PLOD3O60568 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
PLOD3O60568 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PLOD3O60568 AC239859.2-201ENST00000444165 318 ntBASIC21.26■□□□□ 0.99
PLOD3O60568 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PLOD3O60568 AC092028.1-203ENST00000608262 953 ntBASIC21.26■□□□□ 0.99
PLOD3O60568 MIR6722-201ENST00000617286 78 ntBASIC21.26■□□□□ 0.99
PLOD3O60568 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.26■□□□□ 0.99
PLOD3O60568 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PLOD3O60568 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.26■□□□□ 0.99
PLOD3O60568 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PLOD3O60568 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PLOD3O60568 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PLOD3O60568 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.26■□□□□ 0.99
PLOD3O60568 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PLOD3O60568 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PLOD3O60568 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PLOD3O60568 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PLOD3O60568 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PLOD3O60568 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PLOD3O60568 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PLOD3O60568 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PLOD3O60568 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PLOD3O60568 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PLOD3O60568 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.25■□□□□ 0.99
PLOD3O60568 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.25■□□□□ 0.99
PLOD3O60568 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.25■□□□□ 0.99
PLOD3O60568 MIR4787-201ENST00000607364 84 ntBASIC21.25■□□□□ 0.99
PLOD3O60568 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.25■□□□□ 0.99
PLOD3O60568 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PLOD3O60568 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PLOD3O60568 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.24■□□□□ 0.99
PLOD3O60568 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PLOD3O60568 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PLOD3O60568 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.24■□□□□ 0.99
PLOD3O60568 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PLOD3O60568 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.24■□□□□ 0.99
PLOD3O60568 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PLOD3O60568 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PLOD3O60568 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.24■□□□□ 0.99
PLOD3O60568 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.23■□□□□ 0.99
PLOD3O60568 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.23■□□□□ 0.99
PLOD3O60568 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PLOD3O60568 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PLOD3O60568 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
PLOD3O60568 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PLOD3O60568 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.23■□□□□ 0.99
PLOD3O60568 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PLOD3O60568 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PLOD3O60568 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PLOD3O60568 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
PLOD3O60568 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PLOD3O60568 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.23■□□□□ 0.99
PLOD3O60568 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.23■□□□□ 0.99
PLOD3O60568 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PLOD3O60568 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
PLOD3O60568 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PLOD3O60568 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PLOD3O60568 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.22■□□□□ 0.99
PLOD3O60568 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PLOD3O60568 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.22■□□□□ 0.99
PLOD3O60568 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.22■□□□□ 0.99
PLOD3O60568 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.22■□□□□ 0.99
PLOD3O60568 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PLOD3O60568 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PLOD3O60568 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PLOD3O60568 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PLOD3O60568 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PLOD3O60568 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
PLOD3O60568 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.21■□□□□ 0.99
PLOD3O60568 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PLOD3O60568 AL035685.1-201ENST00000636663 812 ntBASIC21.21■□□□□ 0.99
PLOD3O60568 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PLOD3O60568 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms