Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NPHS1O60500 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.15■■□□□ 1.14
NPHS1O60500 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NPHS1O60500 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NPHS1O60500 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
NPHS1O60500 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.14■■□□□ 1.14
NPHS1O60500 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
NPHS1O60500 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPHS1O60500 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPHS1O60500 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NPHS1O60500 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPHS1O60500 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPHS1O60500 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPHS1O60500 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPHS1O60500 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPHS1O60500 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPHS1O60500 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPHS1O60500 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPHS1O60500 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NPHS1O60500 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NPHS1O60500 RARRES2P2-201ENST00000394842 485 ntBASIC22.13■■□□□ 1.13
NPHS1O60500 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.13■■□□□ 1.13
NPHS1O60500 AC022616.5-201ENST00000518796 181 ntBASIC22.13■■□□□ 1.13
NPHS1O60500 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.13■■□□□ 1.13
NPHS1O60500 U85056.1-201ENST00000616429 682 ntBASIC22.13■■□□□ 1.13
NPHS1O60500 EP400NL-214ENST00000641289 2402 ntBASIC22.13■■□□□ 1.13
NPHS1O60500 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPHS1O60500 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.13■■□□□ 1.13
NPHS1O60500 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
NPHS1O60500 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
NPHS1O60500 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPHS1O60500 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPHS1O60500 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
NPHS1O60500 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
NPHS1O60500 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPHS1O60500 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPHS1O60500 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPHS1O60500 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NPHS1O60500 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.12■■□□□ 1.13
NPHS1O60500 AC019171.1-201ENST00000601251 1056 ntBASIC22.12■■□□□ 1.13
NPHS1O60500 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPHS1O60500 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPHS1O60500 GUSBP5-202ENST00000510805 1989 ntBASIC22.11■■□□□ 1.13
NPHS1O60500 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.11■■□□□ 1.13
NPHS1O60500 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.11■■□□□ 1.13
NPHS1O60500 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NPHS1O60500 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.11■■□□□ 1.13
NPHS1O60500 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPHS1O60500 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.11■■□□□ 1.13
NPHS1O60500 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPHS1O60500 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.11■■□□□ 1.13
NPHS1O60500 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPHS1O60500 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPHS1O60500 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.11■■□□□ 1.13
NPHS1O60500 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NPHS1O60500 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
NPHS1O60500 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NPHS1O60500 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.1■■□□□ 1.13
NPHS1O60500 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPHS1O60500 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPHS1O60500 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPHS1O60500 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPHS1O60500 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPHS1O60500 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NPHS1O60500 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
NPHS1O60500 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NPHS1O60500 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.09■■□□□ 1.13
NPHS1O60500 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NPHS1O60500 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.09■■□□□ 1.13
NPHS1O60500 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
NPHS1O60500 LINC00526-201ENST00000581067 1875 ntBASIC22.09■■□□□ 1.13
NPHS1O60500 ECEL1P1-201ENST00000373592 1742 ntBASIC22.09■■□□□ 1.13
NPHS1O60500 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NPHS1O60500 CLDN5-201ENST00000403084 2357 ntBASIC22.08■■□□□ 1.13
NPHS1O60500 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.08■■□□□ 1.13
NPHS1O60500 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
NPHS1O60500 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.08■■□□□ 1.13
NPHS1O60500 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.08■■□□□ 1.13
NPHS1O60500 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
NPHS1O60500 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
NPHS1O60500 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
NPHS1O60500 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NPHS1O60500 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NPHS1O60500 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NPHS1O60500 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.07■■□□□ 1.12
NPHS1O60500 KRT18P60-201ENST00000312876 1297 ntBASIC22.07■■□□□ 1.12
NPHS1O60500 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NPHS1O60500 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NPHS1O60500 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NPHS1O60500 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.07■■□□□ 1.12
NPHS1O60500 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NPHS1O60500 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NPHS1O60500 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
NPHS1O60500 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPHS1O60500 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPHS1O60500 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NPHS1O60500 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPHS1O60500 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.06■■□□□ 1.12
NPHS1O60500 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPHS1O60500 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms