Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
URB1O60287 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
URB1O60287 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
URB1O60287 ERN1-208ENST00000606895 2068 ntBASIC21.47■■□□□ 1.03
URB1O60287 TERF1P2-201ENST00000583350 1212 ntBASIC21.46■■□□□ 1.03
URB1O60287 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
URB1O60287 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
URB1O60287 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
URB1O60287 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.46■■□□□ 1.03
URB1O60287 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
URB1O60287 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.46■■□□□ 1.03
URB1O60287 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
URB1O60287 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
URB1O60287 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.45■■□□□ 1.02
URB1O60287 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
URB1O60287 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
URB1O60287 AC097639.1-201ENST00000565519 1891 ntBASIC21.45■■□□□ 1.02
URB1O60287 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
URB1O60287 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
URB1O60287 AC016769.1-201ENST00000409132 1010 ntBASIC21.45■■□□□ 1.02
URB1O60287 CDCA4P2-201ENST00000441182 718 ntBASIC21.45■■□□□ 1.02
URB1O60287 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.45■■□□□ 1.02
URB1O60287 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
URB1O60287 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
URB1O60287 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
URB1O60287 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
URB1O60287 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
URB1O60287 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.44■■□□□ 1.02
URB1O60287 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
URB1O60287 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
URB1O60287 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
URB1O60287 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.44■■□□□ 1.02
URB1O60287 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
URB1O60287 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.44■■□□□ 1.02
URB1O60287 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
URB1O60287 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
URB1O60287 TMEM191A-211ENST00000637163 1067 ntBASIC21.44■■□□□ 1.02
URB1O60287 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
URB1O60287 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.43■■□□□ 1.02
URB1O60287 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
URB1O60287 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.43■■□□□ 1.02
URB1O60287 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
URB1O60287 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.43■■□□□ 1.02
URB1O60287 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.43■■□□□ 1.02
URB1O60287 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
URB1O60287 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
URB1O60287 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
URB1O60287 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
URB1O60287 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
URB1O60287 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
URB1O60287 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.41■■□□□ 1.02
URB1O60287 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
URB1O60287 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
URB1O60287 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
URB1O60287 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
URB1O60287 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.4■■□□□ 1.02
URB1O60287 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.4■■□□□ 1.02
URB1O60287 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.4■■□□□ 1.02
URB1O60287 MIR6084-201ENST00000622012 110 ntBASIC21.4■■□□□ 1.02
URB1O60287 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.4■■□□□ 1.02
URB1O60287 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
URB1O60287 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
URB1O60287 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.4■■□□□ 1.02
URB1O60287 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.4■■□□□ 1.02
URB1O60287 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
URB1O60287 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.4■■□□□ 1.02
URB1O60287 AC026185.1-201ENST00000445748 174 ntBASIC21.4■■□□□ 1.02
URB1O60287 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.4■■□□□ 1.02
URB1O60287 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
URB1O60287 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
URB1O60287 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.39■■□□□ 1.02
URB1O60287 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.39■■□□□ 1.02
URB1O60287 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.39■■□□□ 1.02
URB1O60287 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.39■■□□□ 1.02
URB1O60287 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
URB1O60287 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.39■■□□□ 1.01
URB1O60287 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
URB1O60287 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
URB1O60287 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
URB1O60287 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.38■■□□□ 1.01
URB1O60287 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
URB1O60287 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
URB1O60287 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.38■■□□□ 1.01
URB1O60287 AL354811.1-201ENST00000610286 706 ntBASIC21.38■■□□□ 1.01
URB1O60287 AC131274.2-201ENST00000580697 1507 ntBASIC21.38■■□□□ 1.01
URB1O60287 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
URB1O60287 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.38■■□□□ 1.01
URB1O60287 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
URB1O60287 AC080038.1-201ENST00000611274 1154 ntBASIC21.38■■□□□ 1.01
URB1O60287 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
URB1O60287 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
URB1O60287 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
URB1O60287 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
URB1O60287 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.37■■□□□ 1.01
URB1O60287 AC104771.1-201ENST00000603335 964 ntBASIC21.37■■□□□ 1.01
URB1O60287 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.37■■□□□ 1.01
URB1O60287 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
URB1O60287 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
URB1O60287 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
URB1O60287 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms