Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
IDH3BO43837 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IDH3BO43837 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IDH3BO43837 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.65■□□□□ 0.9
IDH3BO43837 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.65■□□□□ 0.9
IDH3BO43837 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IDH3BO43837 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IDH3BO43837 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IDH3BO43837 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
IDH3BO43837 AL117328.2-201ENST00000624617 1940 ntBASIC20.65■□□□□ 0.9
IDH3BO43837 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
IDH3BO43837 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.64■□□□□ 0.9
IDH3BO43837 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
IDH3BO43837 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.64■□□□□ 0.89
IDH3BO43837 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
IDH3BO43837 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.64■□□□□ 0.89
IDH3BO43837 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
IDH3BO43837 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IDH3BO43837 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
IDH3BO43837 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IDH3BO43837 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IDH3BO43837 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
IDH3BO43837 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
IDH3BO43837 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IDH3BO43837 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IDH3BO43837 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
IDH3BO43837 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
IDH3BO43837 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
IDH3BO43837 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.63■□□□□ 0.89
IDH3BO43837 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
IDH3BO43837 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
IDH3BO43837 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IDH3BO43837 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IDH3BO43837 LINC00565-201ENST00000562710 2331 ntBASIC20.62■□□□□ 0.89
IDH3BO43837 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IDH3BO43837 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
IDH3BO43837 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
IDH3BO43837 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
IDH3BO43837 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
IDH3BO43837 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IDH3BO43837 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IDH3BO43837 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IDH3BO43837 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
IDH3BO43837 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.61■□□□□ 0.89
IDH3BO43837 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.61■□□□□ 0.89
IDH3BO43837 AL121603.2-201ENST00000557373 2117 ntBASIC20.61■□□□□ 0.89
IDH3BO43837 U85056.1-201ENST00000616429 682 ntBASIC20.61■□□□□ 0.89
IDH3BO43837 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IDH3BO43837 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IDH3BO43837 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IDH3BO43837 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IDH3BO43837 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IDH3BO43837 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IDH3BO43837 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IDH3BO43837 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
IDH3BO43837 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
IDH3BO43837 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IDH3BO43837 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.6■□□□□ 0.89
IDH3BO43837 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IDH3BO43837 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
IDH3BO43837 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
IDH3BO43837 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.6■□□□□ 0.89
IDH3BO43837 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IDH3BO43837 AC011551.1-201ENST00000614101 683 ntBASIC20.6■□□□□ 0.89
IDH3BO43837 AC129492.7-201ENST00000622992 756 ntBASIC20.6■□□□□ 0.89
IDH3BO43837 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
IDH3BO43837 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.6■□□□□ 0.89
IDH3BO43837 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
IDH3BO43837 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IDH3BO43837 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
IDH3BO43837 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
IDH3BO43837 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
IDH3BO43837 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IDH3BO43837 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IDH3BO43837 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
IDH3BO43837 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IDH3BO43837 HSD17B1P1-201ENST00000590052 955 ntBASIC20.59■□□□□ 0.89
IDH3BO43837 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
IDH3BO43837 AL022069.1-201ENST00000568025 1636 ntBASIC20.59■□□□□ 0.89
IDH3BO43837 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.59■□□□□ 0.89
IDH3BO43837 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
IDH3BO43837 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
IDH3BO43837 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
IDH3BO43837 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IDH3BO43837 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
IDH3BO43837 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IDH3BO43837 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
IDH3BO43837 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
IDH3BO43837 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
IDH3BO43837 AC022616.5-201ENST00000518796 181 ntBASIC20.58■□□□□ 0.89
IDH3BO43837 AC019171.1-201ENST00000601251 1056 ntBASIC20.58■□□□□ 0.89
IDH3BO43837 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IDH3BO43837 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
IDH3BO43837 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
IDH3BO43837 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.58■□□□□ 0.88
IDH3BO43837 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IDH3BO43837 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.58■□□□□ 0.88
IDH3BO43837 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
IDH3BO43837 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
IDH3BO43837 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms